RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 HGSNATQ68CP4 663 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 CCDC170Q8IYT3 715 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 ACRBPQ8NEB7 543 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 PPP1R13BQ96KQ4 1090 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 CCDC94Q9BW85 323 aaPredicted RBP15.86■□□□□ 0.13
CBX3-201ENST00000337620 SENP6Q9GZR1 1112 aaPredicted RBP15.86■□□□□ 0.13
CBX3-201ENST00000337620 TRPV6Q9H1D0 765 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 KCND1Q9NSA2 647 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 PHF24Q9UPV7 400 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 DAAM1Q9Y4D1 1078 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 FRMPD3Q5JV73 1810 aa15.86■□□□□ 0.13
CBX3-201ENST00000337620 A0A0U1RQG5 324 aaPredicted RBP15.85■□□□□ 0.13
CBX3-201ENST00000337620 F8VZ95 297 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 B4GALT4O60513 344 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 GFPT2O94808 682 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 GRM5P41594 1212 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 NFX1Q12986 1120 aaKnown RBP15.85■□□□□ 0.13
CBX3-201ENST00000337620 SLC10A6Q3KNW5 377 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 TRAPPC11Q7Z392 1133 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 IRF2BP2Q7Z5L9 587 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 EFCAB13Q8IY85 973 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 KAT5Q92993 513 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 TATDN2Q93075 761 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 ANKRD36BP1Q96IX9 119 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 SNTG2Q9NY99 539 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 MROH7Q68CQ1 1323 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 MEFVO15553 781 aaPredicted RBP15.85■□□□□ 0.13
CBX3-201ENST00000337620 TNNC2P02585 160 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 SOX5P35711 763 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 MFAP3P55082 362 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 MGAT3Q09327 533 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 NCOA4Q13772 614 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 JADE1Q6IE81 842 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 DHX38Q92620 1227 aaKnown RBP15.85■□□□□ 0.13
CBX3-201ENST00000337620 GPR88Q9GZN0 384 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 ST3GAL5Q9UNP4 418 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 HES2Q9Y543 173 aa15.85■□□□□ 0.13
CBX3-201ENST00000337620 ARVCFO00192 962 aa15.84■□□□□ 0.13
CBX3-201ENST00000337620 FOXN3O00409 490 aaPredicted RBP15.84■□□□□ 0.13
CBX3-201ENST00000337620 DNM1LO00429 736 aa15.84■□□□□ 0.13
CBX3-201ENST00000337620 AKR1B10O60218 316 aa15.84■□□□□ 0.13
CBX3-201ENST00000337620 CST3P01034 146 aaPredicted RBP15.84■□□□□ 0.13
CBX3-201ENST00000337620 NFICP08651 508 aa15.84■□□□□ 0.13
CBX3-201ENST00000337620 POU5F1Q01860 360 aaKnown RBP15.84■□□□□ 0.13
CBX3-201ENST00000337620 SCARA3Q6AZY7 606 aa15.84■□□□□ 0.13
CBX3-201ENST00000337620 HELQQ8TDG4 1101 aa15.84■□□□□ 0.13
CBX3-201ENST00000337620 C16orf45Q96MC5 204 aaPredicted RBP15.84■□□□□ 0.13
CBX3-201ENST00000337620 APOL6Q9BWW8 343 aa15.84■□□□□ 0.13
CBX3-201ENST00000337620 ASB7Q9H672 318 aa15.84■□□□□ 0.13
CBX3-201ENST00000337620 HAUS4Q9H6D7 363 aa15.84■□□□□ 0.13
CBX3-201ENST00000337620 C1orf112Q9NSG2 853 aa15.84■□□□□ 0.13
CBX3-201ENST00000337620 ZC3H11AO75152 810 aaKnown RBP eCLIP15.83■□□□□ 0.134e-6■■■■□ 25.4
CBX3-201ENST00000337620 IPO7O95373 1038 aaKnown RBP15.83■□□□□ 0.13
CBX3-201ENST00000337620 FERP16591 822 aa15.83■□□□□ 0.13
CBX3-201ENST00000337620 USP8P40818 1118 aa15.83■□□□□ 0.13
CBX3-201ENST00000337620 TRPC3Q13507 836 aa15.83■□□□□ 0.13
CBX3-201ENST00000337620 TWF2Q6IBS0 349 aaKnown RBP15.83■□□□□ 0.13
CBX3-201ENST00000337620 SPOPLQ6IQ16 392 aa15.83■□□□□ 0.13
CBX3-201ENST00000337620 REXO1L1PQ8IX06 675 aa15.83■□□□□ 0.13
CBX3-201ENST00000337620 SLC43A3Q8NBI5 491 aa15.83■□□□□ 0.13
CBX3-201ENST00000337620 KREMEN1Q96MU8 473 aa15.83■□□□□ 0.13
CBX3-201ENST00000337620 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.83■□□□□ 0.13
CBX3-201ENST00000337620 NXF3Q9H4D5 531 aaKnown RBP15.83■□□□□ 0.13
CBX3-201ENST00000337620 SSU72P8A0A1W2PR75 194 aa15.83■□□□□ 0.12
CBX3-201ENST00000337620 EIF3CLB5ME19 914 aaKnown RBP15.83■□□□□ 0.12
CBX3-201ENST00000337620 EVI5O60447 810 aa15.83■□□□□ 0.12
CBX3-201ENST00000337620 CLCN1P35523 988 aa15.83■□□□□ 0.12
CBX3-201ENST00000337620 KIF11P52732 1056 aa15.83■□□□□ 0.12
CBX3-201ENST00000337620 YARSP54577 528 aaKnown RBP15.83■□□□□ 0.12
CBX3-201ENST00000337620 MAPK8IP2Q13387 824 aaPredicted RBP15.83■□□□□ 0.12
CBX3-201ENST00000337620 DNTTIP2Q5QJE6 756 aaKnown RBP15.83■□□□□ 0.12
CBX3-201ENST00000337620 EIF3CQ99613 913 aaKnown RBP15.83■□□□□ 0.12
CBX3-201ENST00000337620 IMPG2Q9BZV3 1241 aa15.83■□□□□ 0.12
CBX3-201ENST00000337620 BZW2Q9Y6E2 419 aaKnown RBP15.83■□□□□ 0.12
CBX3-201ENST00000337620 ANK1P16157 1881 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 GPR182O15218 404 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 OFD1O75665 1012 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 KRT19P08727 400 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 GHRP10912 638 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 AKAP5P24588 427 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 KRT83P78385 493 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 CYP27A1Q02318 531 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 PTK2Q05397 1052 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 SPA17Q15506 151 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 TRIM71Q2Q1W2 868 aaKnown RBP15.82■□□□□ 0.12
CBX3-201ENST00000337620 UBXN11Q5T124 520 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 ZNF618Q5T7W0 954 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 CTU1Q7Z7A3 348 aaKnown RBP15.82■□□□□ 0.12
CBX3-201ENST00000337620 FMNL3Q8IVF7 1028 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 OSBPL7Q9BZF2 842 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 AGO3Q9H9G7 860 aaKnown RBP15.82■□□□□ 0.12
CBX3-201ENST00000337620 OGDHLQ9ULD0 1010 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 REXO2Q9Y3B8 237 aaKnown RBP15.82■□□□□ 0.12
CBX3-201ENST00000337620 A0A0U1RQJ8 604 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 CCDC172P0C7W6 258 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 CD52P31358 61 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 MYL6P60660 151 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 GCNT1Q02742 428 aa15.82■□□□□ 0.12
CBX3-201ENST00000337620 GFPT1Q06210 699 aaPredicted RBP15.82■□□□□ 0.12
CBX3-201ENST00000337620 TMEM132DQ14C87 1099 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms