RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 SARS2Q9NP81 518 aaKnown RBP13.77□□□□□ -0.21
HLCS-201ENST00000336648 MAD2L2Q9UI95 211 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 NEDD4P46934 1319 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 POTECB2RU33 542 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 FAM107AO95990 144 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 HIST1H2AGP0C0S8 130 aaPredicted RBP13.77□□□□□ -0.21
HLCS-201ENST00000336648 HIST1H2ADP20671 130 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 CYTH1Q15438 398 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 AFG1LQ8WV93 481 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 HIST1H2AHQ96KK5 128 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 PPP1R16BQ96T49 567 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 HIST1H2AJQ99878 128 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 H2AFJQ9BTM1 129 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 FRMD8Q9BZ67 464 aaPredicted RBP13.77□□□□□ -0.21
HLCS-201ENST00000336648 GABBR1Q9UBS5 961 aa13.77□□□□□ -0.21
HLCS-201ENST00000336648 GOLGA8RI6L899 631 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 PHF2O75151 1096 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 NLRP11P59045 1033 aaKnown RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 EIF3EP60228 445 aaKnown RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 RUNX1T1Q06455 604 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 SLC9A5Q14940 896 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 SPATA4Q8NEY3 305 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 CALML6Q8TD86 181 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 LXNQ9BS40 222 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 ROPN1BQ9BZX4 212 aaPredicted RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 ROPN1Q9HAT0 212 aaPredicted RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 SYBUQ9NX95 663 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 HERC5Q9UII4 1024 aaKnown RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 PCDHA10Q9Y5I2 948 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 ZNF335Q9H4Z2 1342 aaPredicted RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 EIF4E1BA6NMX2 242 aaKnown RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 PSMA3P25788 255 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 HMOX2P30519 316 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 MTFR1Q15390 333 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 TRIM71Q2Q1W2 868 aaKnown RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 PID1Q7Z2X4 250 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 MFN1Q8IWA4 741 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 PALLDQ8WX93 1383 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 NPHP4O75161 1426 aaPredicted RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 PPP1R37O75864 691 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 AASDHQ4L235 1098 aaPredicted RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 CDR2LQ86X02 465 aaPredicted RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 MRPL1Q9BYD6 325 aaKnown RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 EPN3Q9H201 632 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 FAM217BQ9NTX9 383 aaPredicted RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 NFKBIL1Q9UBC1 381 aaPredicted RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 PNPLA7Q6ZV29 1317 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 UBA6A0AVT1 1052 aaPredicted RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 TSGA10IPQ3SY00 556 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 RABGAP1LQ5R372 815 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 STK33Q9BYT3 514 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 CCSER1Q9C0I3 900 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 PLEKHA5Q9HAU0 1116 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 DCP1AQ9NPI6 582 aaPredicted RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 SNX12Q9UMY4 172 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 FAM32AQ9Y421 112 aaKnown RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 ZNF211Q13398 564 aaPredicted RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 TKFCQ3LXA3 575 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 OPTNQ96CV9 577 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 MED15Q96RN5 788 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 SLC13A1Q9BZW2 595 aa13.76□□□□□ -0.21
HLCS-201ENST00000336648 PRG3Q9Y2Y8 225 aaPredicted RBP13.76□□□□□ -0.21
HLCS-201ENST00000336648 TBX3O15119 743 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 MDH1P40925 334 aaKnown RBP13.75□□□□□ -0.21
HLCS-201ENST00000336648 CLEC17AQ6ZS10 378 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 RHPN2Q8IUC4 686 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 SPATA17Q96L03 361 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 TJP2Q9UDY2 1190 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 EMSYQ7Z589 1322 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 C5orf58C9J3I9 102 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 CYBBP04839 570 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 GTF2H3Q13889 308 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 PIGHQ14442 188 aaPredicted RBP13.75□□□□□ -0.21
HLCS-201ENST00000336648 SWSAP1Q6NVH7 229 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 ELOA2Q8IYF1 753 aaPredicted RBP13.75□□□□□ -0.21
HLCS-201ENST00000336648 EIF2AK1Q9BQI3 630 aaKnown RBP13.75□□□□□ -0.21
HLCS-201ENST00000336648 RAVER2Q9HCJ3 691 aaKnown RBP13.75□□□□□ -0.21
HLCS-201ENST00000336648 PSMC3IPQ9P2W1 217 aaPredicted RBP13.75□□□□□ -0.21
HLCS-201ENST00000336648 MEFVO15553 781 aaPredicted RBP13.75□□□□□ -0.21
HLCS-201ENST00000336648 TBC1D4O60343 1298 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 SEC24DO94855 1032 aaPredicted RBP13.75□□□□□ -0.21
HLCS-201ENST00000336648 GRK2P25098 689 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 TPI1P60174 286 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 CNGA3Q16281 694 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 CCDC142Q17RM4 750 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 MEI1Q5TIA1 1274 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 HAUS6Q7Z4H7 955 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 TRIM69Q86WT6 500 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 NEDD1Q8NHV4 660 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 PSD3Q9NYI0 1048 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.75□□□□□ -0.21
HLCS-201ENST00000336648 DCDC2Q9UHG0 476 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 NARFQ9UHQ1 456 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 APLFQ8IW19 511 aaPredicted RBP13.75□□□□□ -0.21
HLCS-201ENST00000336648 CXorf56Q9H5V9 222 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 ZNF556Q9HAH1 456 aa13.75□□□□□ -0.21
HLCS-201ENST00000336648 C18orf8Q96DM3 657 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 PIM2Q9P1W9 311 aa13.74□□□□□ -0.21
HLCS-201ENST00000336648 MTO1Q9Y2Z2 717 aaKnown RBP13.74□□□□□ -0.21
HLCS-201ENST00000336648 KRT87PA6NCN2 255 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms