RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 USH1CQ9Y6N9 552 aa14.63□□□□□ -0.07
SYNE3-201ENST00000334258 CLRN2A0PK11 232 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 FAM47DPA6NHR8 397 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 SPDYE5A6NIY4 337 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 PEX11AO75192 247 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 WFS1O76024 890 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 EYA4O95677 639 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 TPBGLP0DKB5 382 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 KLC1Q07866 573 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 STXBP4Q6ZWJ1 553 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 ANKLE1Q8NAG6 615 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 TTC8Q8TAM2 541 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 FAM118BQ9BPY3 351 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 AGPAT3Q9NRZ7 376 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 NINJ2Q9NZG7 142 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 DLGAP2Q9P1A6 1054 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 LRRC42Q9Y546 428 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 POC1B-GALNT4F8VUJ3 575 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 SNHG28P0DPA3 235 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 PTDSS1P48651 473 aaKnown RBP14.62□□□□□ -0.07
SYNE3-201ENST00000334258 CCNG1P51959 295 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 SPIRE1Q08AE8 756 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 ZNF365Q70YC5 407 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 PRUNE1Q86TP1 453 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 CYP2W1Q8TAV3 490 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 ANKRD27Q96NW4 1050 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 LRMDAQ9H2I8 198 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 TMEM165Q9HC07 324 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 EMSYQ7Z589 1322 aa14.62□□□□□ -0.07
SYNE3-201ENST00000334258 FAM86B1E9PN63 330 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 SGPL1O95470 568 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 FAM86B2P0C5J1 330 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 CETPP11597 493 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 TAL1P17542 331 aaPredicted RBP14.61□□□□□ -0.07
SYNE3-201ENST00000334258 RANBP1P43487 201 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 BFSP1Q12934 665 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 CYP1B1Q16678 543 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 PARP6Q2NL67 630 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 HP1BP3Q5SSJ5 553 aaPredicted RBP14.61□□□□□ -0.07
SYNE3-201ENST00000334258 PHLDB2Q86SQ0 1253 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 ARHGEF19Q8IW93 802 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 PPM1KQ8N3J5 372 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 ETNPPLQ8TBG4 499 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 KAT5Q92993 513 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 MKNK1Q9BUB5 465 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 HEMGNQ9BXL5 484 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 TDRD3Q9H7E2 651 aaKnown RBP14.61□□□□□ -0.07
SYNE3-201ENST00000334258 OLFML3Q9NRN5 406 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.61□□□□□ -0.07
SYNE3-201ENST00000334258 CHKBQ9Y259 395 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 ECE2O60344 883 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 CHRNB2P17787 502 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 RAB27AP51159 221 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 APBB1IPQ7Z5R6 666 aaPredicted RBP14.61□□□□□ -0.07
SYNE3-201ENST00000334258 SLF2Q8IX21 1173 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 LRRC8CQ8TDW0 803 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 EML1O00423 815 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 CYP26A1O43174 497 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 DCTN3O75935 186 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 GM2AP17900 193 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 GNAZP19086 355 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 ATP6V1C1P21283 382 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 HOXA13P31271 388 aaPredicted RBP14.61□□□□□ -0.07
SYNE3-201ENST00000334258 GSTA5Q7RTV2 222 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 SUPT20HQ8NEM7 779 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 PCDHB18PQ96TA0 734 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 ZCWPW1Q9H0M4 648 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 VCXQ9H320 206 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 LRRC19Q9H756 370 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 LMCD1Q9NZU5 365 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 SERPINB13Q9UIV8 391 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 ZNF232Q9UNY5 417 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 FRMPD4Q14CM0 1322 aa14.61□□□□□ -0.07
SYNE3-201ENST00000334258 EXOC1LA0A1B0GW35 172 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 SLC26A4O43511 780 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 AHCYL1O43865 530 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 TUBP50607 506 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 POLE2P56282 527 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 WDR4P57081 412 aaKnown RBP14.6□□□□□ -0.07
SYNE3-201ENST00000334258 CDC42EP5Q6NZY7 148 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 SYT15Q9BQS2 421 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 EIF3DO15371 548 aaKnown RBP eCLIP14.6□□□□□ -0.07
SYNE3-201ENST00000334258 MSH4O15457 936 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 GDF11O95390 407 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 FESP07332 822 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 HADHBP55084 474 aaKnown RBP14.6□□□□□ -0.07
SYNE3-201ENST00000334258 DLG4P78352 724 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 CCDC15Q0P6D6 951 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 SPARCL1Q14515 664 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 ZFYVE27Q5T4F4 411 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 C4orf33Q8N1A6 199 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 TRAIPQ9BWF2 469 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 CYP3A7-CYP3A51PA0A087WV96 503 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 CA4P22748 312 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 CYP3A7P24462 503 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 GJC1P36383 396 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 ACVR2BQ13705 512 aa14.6□□□□□ -0.07
SYNE3-201ENST00000334258 SIX1Q15475 284 aaPredicted RBP14.6□□□□□ -0.07
SYNE3-201ENST00000334258 SEPT7Q16181 437 aaKnown RBP14.6□□□□□ -0.07
SYNE3-201ENST00000334258 HHATQ5VTY9 493 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms