RNA–Protein interactions for RNA: ENST00000332408.8

SHC4-201, Transcript of SHC adaptor protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHC4, Length 4,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-201ENST00000332408 ST7Q9NRC1 585 aa12.35□□□□□ -0.43
SHC4-201ENST00000332408 PCDHA5Q9Y5H7 936 aa12.35□□□□□ -0.43
SHC4-201ENST00000332408 TMEM150BA6NC51 233 aa12.35□□□□□ -0.43
SHC4-201ENST00000332408 PDXKO00764 312 aa12.35□□□□□ -0.43
SHC4-201ENST00000332408 RECQL4O94761 1208 aa12.35□□□□□ -0.43
SHC4-201ENST00000332408 ATG7O95352 703 aa12.35□□□□□ -0.43
SHC4-201ENST00000332408 CTNNA2P26232 953 aa12.35□□□□□ -0.43
SHC4-201ENST00000332408 RPL9P32969 192 aaKnown RBP12.35□□□□□ -0.43
SHC4-201ENST00000332408 MLH1P40692 756 aa12.35□□□□□ -0.43
SHC4-201ENST00000332408 CAPSQ13938 189 aa12.35□□□□□ -0.43
SHC4-201ENST00000332408 HLTFQ14527 1009 aaKnown RBP eCLIP12.35□□□□□ -0.43
SHC4-201ENST00000332408 C1orf53Q5VUE5 145 aa12.35□□□□□ -0.43
SHC4-201ENST00000332408 TRIM9Q9C026 710 aa12.35□□□□□ -0.43
SHC4-201ENST00000332408 CLDND1Q9NY35 253 aa12.35□□□□□ -0.43
SHC4-201ENST00000332408 SNX9Q9Y5X1 595 aa12.35□□□□□ -0.43
SHC4-201ENST00000332408 OPLAHO14841 1288 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 AKAP5P24588 427 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 CCNE1P24864 410 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 TUSC3Q13454 348 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 SIX6OS1Q8N1H7 587 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 SEPT5Q99719 369 aaPredicted RBP12.34□□□□□ -0.43
SHC4-201ENST00000332408 PLEKHA5Q9HAU0 1116 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 NPHP3-ACAD11A0A0J9YXS1 232 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 CTAGE9A4FU28 777 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 PTPAQ15257 358 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 ECHDC2Q86YB7 292 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 JAKMIP2Q96AA8 810 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 MBOAT7Q96N66 472 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 KIF2CQ99661 725 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 DPP3Q9NY33 737 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 HSPBP1Q9NZL4 362 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 SEPT7Q16181 437 aaKnown RBP12.34□□□□□ -0.43
SHC4-201ENST00000332408 LEKR1Q6ZMV7 388 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 STKLD1Q8NE28 680 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 MRPS31Q92665 395 aaKnown RBP12.34□□□□□ -0.43
SHC4-201ENST00000332408 PLVAPQ9BX97 442 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 IMPACTQ9P2X3 320 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 PCDHB4Q9Y5E5 795 aa12.34□□□□□ -0.43
SHC4-201ENST00000332408 CYP27A1Q02318 531 aa12.33□□□□□ -0.43
SHC4-201ENST00000332408 YWHAHQ04917 246 aaPredicted RBP12.33□□□□□ -0.43
SHC4-201ENST00000332408 CKAP4Q07065 602 aaKnown RBP12.33□□□□□ -0.43
SHC4-201ENST00000332408 LPIN1Q14693 890 aa12.33□□□□□ -0.43
SHC4-201ENST00000332408 DCLRE1AQ6PJP8 1040 aa12.33□□□□□ -0.43
SHC4-201ENST00000332408 GAS2L3Q86XJ1 694 aa12.33□□□□□ -0.43
SHC4-201ENST00000332408 GUF1Q8N442 669 aaKnown RBP12.33□□□□□ -0.43
SHC4-201ENST00000332408 XPO4Q9C0E2 1151 aaKnown RBP12.33□□□□□ -0.43
SHC4-201ENST00000332408 ZNF576Q9H609 170 aa12.33□□□□□ -0.43
SHC4-201ENST00000332408 ELAC1Q9H777 363 aaKnown RBP12.33□□□□□ -0.43
SHC4-201ENST00000332408 STRIP2Q9ULQ0 834 aa12.33□□□□□ -0.43
SHC4-201ENST00000332408 CTAGE15A4D2H0 777 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 CTAGE8P0CG41 777 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 POLR2BP30876 1174 aaKnown RBP12.33□□□□□ -0.44
SHC4-201ENST00000332408 LRMPQ12912 555 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 NR1H3Q13133 447 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 RBM23Q86U06 439 aaKnown RBP12.33□□□□□ -0.44
SHC4-201ENST00000332408 CTAGE6Q86UF2 777 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 CTAGE4Q8IX94 777 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 HEXIM2Q96MH2 286 aaKnown RBP12.33□□□□□ -0.44
SHC4-201ENST00000332408 OXCT2Q9BYC2 517 aaPredicted RBP12.33□□□□□ -0.44
SHC4-201ENST00000332408 PDE6CP51160 858 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 SHHQ15465 462 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 TMEM192Q8IY95 271 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 KAT2BQ92831 832 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 CASP10Q92851 521 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 CCDC113Q9H0I3 377 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 CYP4F11Q9HBI6 524 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 IPPQ9Y573 584 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 MYMKA6NI61 221 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 ENPP3O14638 875 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 TBXAS1P24557 533 aaPredicted RBP12.33□□□□□ -0.44
SHC4-201ENST00000332408 PTK2Q05397 1052 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 ZNF569Q5MCW4 686 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 HERVK_113Q902F9 699 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 TRIM62Q9BVG3 475 aa12.33□□□□□ -0.44
SHC4-201ENST00000332408 MAGED2Q9UNF1 606 aaPredicted RBP12.33□□□□□ -0.44
SHC4-201ENST00000332408 RALAP11233 206 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 GRIK1P39086 918 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 TUFMP49411 452 aaKnown RBP12.32□□□□□ -0.44
SHC4-201ENST00000332408 SYT10Q6XYQ8 523 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 SCARA5Q6ZMJ2 495 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 TAX1BP1Q86VP1 789 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 VPS52Q8N1B4 723 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 TCF25Q9BQ70 676 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 TMEM175Q9BSA9 504 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 NUP58Q9BVL2 599 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 AGPAT5Q9NUQ2 364 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 LSM7Q9UK45 103 aaKnown RBP12.32□□□□□ -0.44
SHC4-201ENST00000332408 PODXLO00592 558 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 AFPP02771 609 aaKnown RBP12.32□□□□□ -0.44
SHC4-201ENST00000332408 CA3P07451 260 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 LHX1P48742 406 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 VAMP7P51809 220 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 EARS2Q5JPH6 523 aaKnown RBP12.32□□□□□ -0.44
SHC4-201ENST00000332408 LPPQ93052 612 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 TBX21Q9UL17 535 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 A0A0U1RQF3 1178 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 CUL4BQ13620 913 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 E2F5Q15329 346 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 CCDC122Q5T0U0 273 aa12.32□□□□□ -0.44
SHC4-201ENST00000332408 LLGL2Q6P1M3 1020 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms