RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 ABCD1P33897 745 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 SKOR1P84550 965 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 ZNF844Q08AG5 666 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 DHX34Q14147 1143 aaKnown RBP15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 CLUL1Q15846 466 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 LY6KQ17RY6 165 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 MORC4Q8TE76 937 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 FMO2Q99518 471 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 RSPH14Q9UHP6 348 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 ANAPC7Q9UJX3 599 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 PCDHA3Q9Y5H8 950 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 CSADQ9Y600 493 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 IRF6O14896 467 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 GGPS1O95749 300 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 PIGRP01833 764 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 CFHP08603 1231 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 EDNRBP24530 442 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 CTNNA2P26232 953 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 TCF7P36402 384 aaPredicted RBP15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 STAT5BP51692 787 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 TARBP2Q15633 366 aaKnown RBP15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 LRIG3Q6UXM1 1119 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 MCOLN2Q8IZK6 566 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 OR5B17Q8NGF7 314 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 OTUD5Q96G74 571 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 MAF1Q9H063 256 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 ELP3Q9H9T3 547 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 TMBIM4Q9HC24 238 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 KCNG1Q9UIX4 513 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 ATP8A1Q9Y2Q0 1164 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 PCDHB2Q9Y5E7 798 aa15.91■□□□□ 0.14
CLCNKA-201ENST00000331433 A0A0B4J269 797 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 GOLGA6L10A6NI86 522 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 EIF3HO15372 352 aaKnown RBP eCLIP15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 PPFIA4O75335 1185 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 NR1D1P20393 614 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 RRM1P23921 792 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 CHRNA3P32297 505 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 PTGIRP43119 386 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 PLTPP55058 493 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 PPARDQ03181 441 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 SLFN12LQ6IEE8 588 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 SLC13A5Q86YT5 568 aaPredicted RBP15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 CYFIP2Q96F07 1278 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 ZDHHC18Q9NUE0 388 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 LCMT1Q9UIC8 334 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 UMODL1Q5DID0 1318 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 OTOFQ9HC10 1997 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 FAM187AA6NFU0 413 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 MYO1FO00160 1098 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 KIAA0391O15091 583 aaKnown RBP15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 PGK2P07205 417 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 MYZAPP0CAP1 466 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 HSPA6P17066 643 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 ACO1P21399 889 aaKnown RBP15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 SCP2P22307 547 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 MARK3P27448 753 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 MAPK4P31152 587 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 IRX3P78415 501 aaPredicted RBP15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 CCDC137Q6PK04 289 aaKnown RBP15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 KDM7AQ6ZMT4 941 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 TRIM50Q86XT4 487 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 PASD1Q8IV76 773 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 CLMNQ96JQ2 1002 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 LRRC4CQ9HCJ2 640 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 SIP14410 1827 aa15.9■□□□□ 0.14
CLCNKA-201ENST00000331433 ADGRA2Q96PE1 1338 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 RARAP10276 462 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 HPDP32754 393 aaPredicted RBP15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 RWDD2BP57060 319 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 GUCY1A3Q02108 690 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 MTMR3Q13615 1198 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 CUL2Q13617 745 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 DAB2IPQ5VWQ8 1189 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 TMEM270Q6UE05 265 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 FBXO25Q8TCJ0 367 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 PRPF31Q8WWY3 499 aaKnown RBP15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 NRBP2Q9NSY0 501 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 PTPN22Q9Y2R2 807 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 A0A0G2JMZ2 1700 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 MROH7Q68CQ1 1323 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 CNTNAP2Q9UHC6 1331 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 HMGB1P1B2RPK0 211 aaPredicted RBP15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 CLDN3O15551 220 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 ADCY3O60266 1144 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 ARIH2O95376 493 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 RFC5P40937 340 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 TNFSF9P41273 254 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 NSFP46459 744 aaKnown RBP15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 KCNJ1P48048 391 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 MKRN4PQ13434 485 aaPredicted RBP15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 NEDD9Q14511 834 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 SIX1Q15475 284 aaPredicted RBP15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 ZDHHC24Q6UX98 284 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 ZBTB33Q86T24 672 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 FAM81BQ96LP2 452 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 PCYOX1Q9UHG3 505 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 RASAL2Q9UJF2 1139 aa15.89■□□□□ 0.13
CLCNKA-201ENST00000331433 NUB1Q9Y5A7 615 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms