RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SNX1Q13596 522 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 ITIH4Q14624 930 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 CLEC16AQ2KHT3 1053 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 ZNF568Q3ZCX4 644 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 CYB5D1Q6P9G0 228 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 ELMO3Q96BJ8 720 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 ZNF341Q9BYN7 854 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 A1CFQ9NQ94 594 aaKnown RBP16.42■□□□□ 0.22
BRCC3-201ENST00000330045 HOMER2Q9NSB8 354 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 ANAPC7Q9UJX3 599 aa16.42■□□□□ 0.22
BRCC3-201ENST00000330045 VIMP08670 466 aaKnown RBP16.41■□□□□ 0.22
BRCC3-201ENST00000330045 KRT5P13647 590 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 JAK3P52333 1124 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 XRCC4Q13426 336 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 MKRN4PQ13434 485 aaPredicted RBP16.41■□□□□ 0.22
BRCC3-201ENST00000330045 CNGA2Q16280 664 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 CCDC38Q502W7 563 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 SV2AQ7L0J3 742 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 USP37Q86T82 979 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 EXOC3L1Q86VI1 746 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 SGSM3Q96HU1 749 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 MFSD14AQ96MC6 490 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 RAVER2Q9HCJ3 691 aaKnown RBP16.41■□□□□ 0.22
BRCC3-201ENST00000330045 CD248Q9HCU0 757 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 KMT5AQ9NQR1 393 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 ASIC3Q9UHC3 531 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 WDR64B1ANS9 1081 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 TP73O15350 636 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 DNAJC8O75937 253 aaPredicted RBP16.41■□□□□ 0.22
BRCC3-201ENST00000330045 MYCLP12524 364 aaPredicted RBP16.41■□□□□ 0.22
BRCC3-201ENST00000330045 ITIH2P19823 946 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 GTF2H1P32780 548 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 IFNAR2P48551 515 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 PGM5Q15124 567 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 LONRF1Q17RB8 773 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 ANGEL2Q5VTE6 544 aaKnown RBP16.41■□□□□ 0.22
BRCC3-201ENST00000330045 CCDC91Q7Z6B0 441 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 POMGNT1Q8WZA1 660 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 FBXL18Q96ME1 805 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 ELAC2Q9BQ52 826 aaKnown RBP16.41■□□□□ 0.22
BRCC3-201ENST00000330045 DDX23Q9BUQ8 820 aaKnown RBP16.41■□□□□ 0.22
BRCC3-201ENST00000330045 YY1AP1Q9H869 796 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 AAASQ9NRG9 546 aa16.41■□□□□ 0.22
BRCC3-201ENST00000330045 ACSL3O95573 720 aa16.4■□□□□ 0.22
BRCC3-201ENST00000330045 CCNE2O96020 404 aa16.4■□□□□ 0.22
BRCC3-201ENST00000330045 SCP2P22307 547 aa16.4■□□□□ 0.22
BRCC3-201ENST00000330045 RPS12P25398 132 aaKnown RBP16.4■□□□□ 0.22
BRCC3-201ENST00000330045 SFNP31947 248 aa16.4■□□□□ 0.22
BRCC3-201ENST00000330045 HIRAP54198 1017 aaPredicted RBP16.4■□□□□ 0.22
BRCC3-201ENST00000330045 RPS6P62753 249 aaKnown RBP16.4■□□□□ 0.22
BRCC3-201ENST00000330045 MAP3K10Q02779 954 aa16.4■□□□□ 0.22
BRCC3-201ENST00000330045 SF3A3Q12874 501 aaKnown RBP eCLIP16.4■□□□□ 0.22
BRCC3-201ENST00000330045 PARP9Q8IXQ6 854 aa16.4■□□□□ 0.22
BRCC3-201ENST00000330045 MAIP1Q8WWC4 291 aa16.4■□□□□ 0.22
BRCC3-201ENST00000330045 NSRP1Q9H0G5 558 aaKnown RBP16.4■□□□□ 0.22
BRCC3-201ENST00000330045 HOMER3Q9NSC5 361 aa16.4■□□□□ 0.22
BRCC3-201ENST00000330045 MAP3K20Q9NYL2 800 aaKnown RBP16.4■□□□□ 0.22
BRCC3-201ENST00000330045 CYP24A1Q07973 514 aa16.4■□□□□ 0.22
BRCC3-201ENST00000330045 SLC39A4Q6P5W5 647 aa16.4■□□□□ 0.22
BRCC3-201ENST00000330045 RHBDF2Q6PJF5 856 aa16.4■□□□□ 0.22
BRCC3-201ENST00000330045 PLCD3Q8N3E9 789 aa16.4■□□□□ 0.22
BRCC3-201ENST00000330045 SERPINB12Q96P63 405 aa16.4■□□□□ 0.22
BRCC3-201ENST00000330045 CHST7Q9NS84 486 aa16.4■□□□□ 0.22
BRCC3-201ENST00000330045 WDR46O15213 610 aaKnown RBP16.39■□□□□ 0.21
BRCC3-201ENST00000330045 CALCAP01258 141 aa16.39■□□□□ 0.21
BRCC3-201ENST00000330045 UNGP13051 313 aaPredicted RBP16.39■□□□□ 0.21
BRCC3-201ENST00000330045 KRT76Q01546 638 aa16.39■□□□□ 0.21
BRCC3-201ENST00000330045 GCNT1Q02742 428 aa16.39■□□□□ 0.21
BRCC3-201ENST00000330045 SNCBQ16143 134 aa16.39■□□□□ 0.21
BRCC3-201ENST00000330045 SYDE1Q6ZW31 735 aaPredicted RBP16.39■□□□□ 0.21
BRCC3-201ENST00000330045 ANO5Q75V66 913 aa16.39■□□□□ 0.21
BRCC3-201ENST00000330045 ENOSF1Q7L5Y1 443 aa16.39■□□□□ 0.21
BRCC3-201ENST00000330045 MCOLN2Q8IZK6 566 aa16.39■□□□□ 0.21
BRCC3-201ENST00000330045 ATG4AQ8WYN0 398 aa16.39■□□□□ 0.21
BRCC3-201ENST00000330045 ZKSCAN4Q969J2 545 aaPredicted RBP16.39■□□□□ 0.21
BRCC3-201ENST00000330045 SNF8Q96H20 258 aa16.39■□□□□ 0.21
BRCC3-201ENST00000330045 FAM81BQ96LP2 452 aa16.39■□□□□ 0.21
BRCC3-201ENST00000330045 NTPCRQ9BSD7 190 aaKnown RBP16.39■□□□□ 0.21
BRCC3-201ENST00000330045 PI4K2AQ9BTU6 479 aa16.39■□□□□ 0.21
BRCC3-201ENST00000330045 MAN1A1P33908 653 aa16.39■□□□□ 0.21
BRCC3-201ENST00000330045 RDXP35241 583 aaKnown RBP16.39■□□□□ 0.21
BRCC3-201ENST00000330045 CHKAP35790 457 aa16.39■□□□□ 0.21
BRCC3-201ENST00000330045 CCDC50Q8IVM0 306 aa16.39■□□□□ 0.21
BRCC3-201ENST00000330045 BSNDQ8WZ55 320 aa16.39■□□□□ 0.21
BRCC3-201ENST00000330045 ARHGEF2Q92974 986 aaKnown RBP16.39■□□□□ 0.21
BRCC3-201ENST00000330045 TRIM7Q9C029 511 aa16.39■□□□□ 0.21
BRCC3-201ENST00000330045 SLC38A10Q9HBR0 1119 aa16.39■□□□□ 0.21
BRCC3-201ENST00000330045 TESPA1A2RU30 521 aaPredicted RBP16.38■□□□□ 0.21
BRCC3-201ENST00000330045 IVDP26440 423 aa16.38■□□□□ 0.21
BRCC3-201ENST00000330045 SLC1A1P43005 524 aa16.38■□□□□ 0.21
BRCC3-201ENST00000330045 PTK6Q13882 451 aa16.38■□□□□ 0.21
BRCC3-201ENST00000330045 GPD1LQ8N335 351 aa16.38■□□□□ 0.21
BRCC3-201ENST00000330045 GRK7Q8WTQ7 553 aa16.38■□□□□ 0.21
BRCC3-201ENST00000330045 DYDC1Q8WWB3 177 aa16.38■□□□□ 0.21
BRCC3-201ENST00000330045 SPIRE2Q8WWL2 714 aa16.38■□□□□ 0.21
BRCC3-201ENST00000330045 RMDN3Q96TC7 470 aa16.38■□□□□ 0.21
BRCC3-201ENST00000330045 AVENQ9NQS1 362 aaPredicted RBP16.38■□□□□ 0.21
BRCC3-201ENST00000330045 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.38■□□□□ 0.21
BRCC3-201ENST00000330045 MROH7Q68CQ1 1323 aa16.38■□□□□ 0.21
BRCC3-201ENST00000330045 GAS8O95995 478 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms