RNA–Protein interactions for RNA: ENST00000328945.6

SDR42E1-201, Transcript of short chain dehydrogenase/reductase family 42E, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDR42E1, Length 11,566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR42E1-201ENST00000328945 CCND2P30279 289 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 CCDC85BQ15834 202 aaPredicted RBP5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 CIAPIN1Q6FI81 312 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 SCUBE1Q8IWY4 988 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 TRIM51Q9BSJ1 452 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 LIMA1Q9UHB6 759 aaKnown RBP5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 RAB21Q9UL25 225 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 PCDHB6Q9Y5E3 794 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 ITSN1Q15811 1721 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 A8MXQ7 604 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 INO80B-WBP1J3KQ70 363 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 EFCAB14O75071 495 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 PPIDQ08752 370 aaKnown RBP5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 STX19Q8N4C7 294 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 CCDC127Q96BQ5 260 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 CCDC28BQ9BUN5 200 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 INO80BQ9C086 356 aaPredicted RBP5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 NFIBO00712 420 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 SOX6P35712 828 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 RFC5P40937 340 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 ELF3P78545 371 aaPredicted RBP5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 PLOD1Q02809 727 aaPredicted RBP5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 TOB2Q14106 344 aaPredicted RBP5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 ARMCX4Q5H9R4 360 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 IZUMO3Q5VZ72 239 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 CWF19L1Q69YN2 538 aaKnown RBP5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 SIX5Q8N196 739 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 DNAAF3Q8N9W5 541 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 GTSE1Q9NYZ3 720 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 ZNF212Q9UDV6 495 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 SRP68Q9UHB9 627 aaKnown RBP5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 XDHP47989 1333 aa5.65□□□□□ -1.5
SDR42E1-201ENST00000328945 USP17L3A6NCW0 530 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 USP17L4A6NCW7 530 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 TMEM247A6NEH6 219 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 PSMA4P25789 261 aaKnown RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 HOXD10P28358 340 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 ZAP70P43403 619 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 RINLQ6ZS11 566 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 MARK2Q7KZI7 788 aaKnown RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 USP17L1Q7RTZ2 530 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 ARL10Q8N8L6 244 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 SCG3Q8WXD2 468 aaKnown RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 TMBIM4Q9HC24 238 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 SH3GLB2Q9NR46 395 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 AMACRQ9UHK6 382 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 HEATR1Q9H583 2144 aaKnown RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 TAF4O00268 1085 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 SRP72O76094 671 aaKnown RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 CALB1P05937 261 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 ADORA1P30542 326 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 SLC12A1Q13621 1099 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 TFDP1Q14186 410 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 LPCAT2Q7L5N7 544 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 ZNF786Q8N393 782 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 OR2W6PQ8NHA6 318 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 SDR42E1Q8WUS8 393 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 ATP6V1E2Q96A05 226 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 COA7Q96BR5 231 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 GCOM2Q9BZD3 368 aaPredicted RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 CAAP1Q9H8G2 361 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 MANSC1Q9H8J5 431 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 F8VZ95 297 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 RAD51CO43502 376 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 C21orf59P57076 290 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 POTEEQ6S8J3 1075 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 TRIM69Q86WT6 500 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 MXD3Q9BW11 206 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 CALN1Q9BXU9 219 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 RPAP3Q9H6T3 665 aaPredicted RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 SLC38A10Q9HBR0 1119 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 A1CFQ9NQ94 594 aaKnown RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 PIM2Q9P1W9 311 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 DAPK2Q9UIK4 370 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 INPP5FQ9Y2H2 1132 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 NEURL1BA8MQ27 555 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 DNALI1O14645 258 aaPredicted RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 BNIP3LO60238 219 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 AASDHQ4L235 1098 aaPredicted RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 HEATR4Q86WZ0 1026 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 FAF2Q96CS3 445 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 RBM15Q96T37 977 aaKnown RBP eCLIP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 IRX2Q9BZI1 471 aaPredicted RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 COPG2Q9UBF2 871 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 HERC5Q9UII4 1024 aaKnown RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 PCDHA12Q9UN75 941 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 GDAQ9Y2T3 454 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 CPSF1Q10570 1443 aaKnown RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 CROCC2H7BZ55 1655 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 CACNA1EQ15878 2313 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 MAGI2Q86UL8 1455 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 SMIM31A0A1B0GVY4 71 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 SAC3D1A6NKF1 404 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 PRPSAP2O60256 369 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 ERFP50548 548 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 RPS6KA3P51812 740 aa5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 CCNHP51946 323 aaPredicted RBP5.65□□□□□ -1.51
SDR42E1-201ENST00000328945 CYP4A11Q02928 519 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms