RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 DCNP07585 359 aaKnown RBP27.5■■□□□ 1.99
PPP4R4-202ENST00000328839 TKTP29401 623 aaKnown RBP27.5■■□□□ 1.99
PPP4R4-202ENST00000328839 NPTX2P47972 431 aa27.5■■□□□ 1.99
PPP4R4-202ENST00000328839 DMP1Q13316 513 aaPredicted RBP27.5■■□□□ 1.99
PPP4R4-202ENST00000328839 UPP1Q16831 310 aa27.5■■□□□ 1.99
PPP4R4-202ENST00000328839 FGF13Q92913 245 aa27.5■■□□□ 1.99
PPP4R4-202ENST00000328839 SLC2A4RGQ9NR83 387 aa27.5■■□□□ 1.99
PPP4R4-202ENST00000328839 TOPORSQ9NS56 1045 aaPredicted RBP27.5■■□□□ 1.99
PPP4R4-202ENST00000328839 HCFC1R1Q9NWW0 138 aa27.5■■□□□ 1.99
PPP4R4-202ENST00000328839 DNM3Q9UQ16 869 aa27.5■■□□□ 1.99
PPP4R4-202ENST00000328839 SMIM28A0A1B0GU29 152 aa27.49■■□□□ 1.99
PPP4R4-202ENST00000328839 PP2D1A8MPX8 630 aa27.49■■□□□ 1.99
PPP4R4-202ENST00000328839 HIP1RO75146 1068 aa27.49■■□□□ 1.99
PPP4R4-202ENST00000328839 BRCC3P46736 316 aa27.49■■□□□ 1.99
PPP4R4-202ENST00000328839 KRT79Q5XKE5 535 aa27.49■■□□□ 1.99
PPP4R4-202ENST00000328839 MTSS1LQ765P7 747 aa27.49■■□□□ 1.99
PPP4R4-202ENST00000328839 IGSF22Q8N9C0 903 aa27.49■■□□□ 1.99
PPP4R4-202ENST00000328839 ITFG1Q8TB96 612 aa27.49■■□□□ 1.99
PPP4R4-202ENST00000328839 CDT1Q9H211 546 aa27.49■■□□□ 1.99
PPP4R4-202ENST00000328839 DAXXQ9UER7 740 aaPredicted RBP27.49■■□□□ 1.99
PPP4R4-202ENST00000328839 SIT1Q9Y3P8 196 aa27.49■■□□□ 1.99
PPP4R4-202ENST00000328839 NOTCH4Q99466 2003 aa27.49■■□□□ 1.99
PPP4R4-202ENST00000328839 FAM186AA6NE01 2351 aa27.48■■□□□ 1.99
PPP4R4-202ENST00000328839 GRM5P41594 1212 aa27.48■■□□□ 1.99
PPP4R4-202ENST00000328839 TOB1P50616 345 aaPredicted RBP27.48■■□□□ 1.99
PPP4R4-202ENST00000328839 GPC5P78333 572 aa27.48■■□□□ 1.99
PPP4R4-202ENST00000328839 UVSSAQ2YD98 709 aa27.48■■□□□ 1.99
PPP4R4-202ENST00000328839 PHLDB3Q6NSJ2 640 aa27.48■■□□□ 1.99
PPP4R4-202ENST00000328839 ANKS3Q6ZW76 656 aa27.48■■□□□ 1.99
PPP4R4-202ENST00000328839 ADSSL1Q8N142 457 aa27.48■■□□□ 1.99
PPP4R4-202ENST00000328839 C3orf58Q8NDZ4 430 aa27.48■■□□□ 1.99
PPP4R4-202ENST00000328839 DDX27Q96GQ7 796 aaKnown RBP27.48■■□□□ 1.99
PPP4R4-202ENST00000328839 ACO2Q99798 780 aaKnown RBP27.48■■□□□ 1.99
PPP4R4-202ENST00000328839 TCHPQ9BT92 498 aa27.48■■□□□ 1.99
PPP4R4-202ENST00000328839 MRPL4Q9BYD3 311 aaKnown RBP27.48■■□□□ 1.99
PPP4R4-202ENST00000328839 KMT5AQ9NQR1 393 aa27.48■■□□□ 1.99
PPP4R4-202ENST00000328839 HARSP12081 509 aaKnown RBP27.47■■□□□ 1.99
PPP4R4-202ENST00000328839 U2AF2P26368 475 aaKnown RBP eCLIP27.47■■□□□ 1.99
PPP4R4-202ENST00000328839 CDC25AP30304 524 aa27.47■■□□□ 1.99
PPP4R4-202ENST00000328839 SOX4Q06945 474 aaPredicted RBP27.47■■□□□ 1.99
PPP4R4-202ENST00000328839 ZRSR1Q15695 479 aaKnown RBP27.47■■□□□ 1.99
PPP4R4-202ENST00000328839 PABPC1LQ4VXU2 614 aaKnown RBP27.47■■□□□ 1.99
PPP4R4-202ENST00000328839 CD300LGQ6UXG3 332 aa27.47■■□□□ 1.99
PPP4R4-202ENST00000328839 RSPO2Q6UXX9 243 aaPredicted RBP27.47■■□□□ 1.99
PPP4R4-202ENST00000328839 KCNG4Q8TDN1 519 aa27.47■■□□□ 1.99
PPP4R4-202ENST00000328839 ING5Q8WYH8 240 aa27.47■■□□□ 1.99
PPP4R4-202ENST00000328839 DRC1Q96MC2 740 aa27.47■■□□□ 1.99
PPP4R4-202ENST00000328839 RUSC1Q9BVN2 902 aa27.47■■□□□ 1.99
PPP4R4-202ENST00000328839 TARS2Q9BW92 718 aaKnown RBP27.47■■□□□ 1.99
PPP4R4-202ENST00000328839 FOXQ1Q9C009 403 aa27.47■■□□□ 1.99
PPP4R4-202ENST00000328839 RIF1Q5UIP0 2472 aaKnown RBP27.47■■□□□ 1.99
PPP4R4-202ENST00000328839 DAW1Q8N136 415 aa27.46■■□□□ 1.99
PPP4R4-202ENST00000328839 KXD1Q9BQD3 176 aa27.46■■□□□ 1.99
PPP4R4-202ENST00000328839 TMEM134Q9H6X4 195 aa27.46■■□□□ 1.99
PPP4R4-202ENST00000328839 SLC38A7Q9NVC3 462 aa27.46■■□□□ 1.99
PPP4R4-202ENST00000328839 DNMT3BQ9UBC3 853 aaKnown RBP27.46■■□□□ 1.99
PPP4R4-202ENST00000328839 BACE2Q9Y5Z0 518 aa27.46■■□□□ 1.99
PPP4R4-202ENST00000328839 PDCD11Q14690 1871 aaKnown RBP27.45■■□□□ 1.99
PPP4R4-202ENST00000328839 PODXLO00592 558 aa27.45■■□□□ 1.98
PPP4R4-202ENST00000328839 SNW1Q13573 536 aaKnown RBP27.45■■□□□ 1.98
PPP4R4-202ENST00000328839 DTHD1Q6ZMT9 781 aa27.45■■□□□ 1.98
PPP4R4-202ENST00000328839 SHDQ96IW2 340 aa27.45■■□□□ 1.98
PPP4R4-202ENST00000328839 ARHGAP28Q9P2N2 729 aa27.45■■□□□ 1.98
PPP4R4-202ENST00000328839 COL4A3Q01955 1670 aa27.44■■□□□ 1.98
PPP4R4-202ENST00000328839 LAD1O00515 517 aa27.44■■□□□ 1.98
PPP4R4-202ENST00000328839 SLC16A4O15374 487 aa27.44■■□□□ 1.98
PPP4R4-202ENST00000328839 POU2F2P09086 479 aa27.44■■□□□ 1.98
PPP4R4-202ENST00000328839 ARPP19P56211 112 aa27.44■■□□□ 1.98
PPP4R4-202ENST00000328839 RINT1Q6NUQ1 792 aa27.44■■□□□ 1.98
PPP4R4-202ENST00000328839 TAS1R3Q7RTX0 852 aa27.44■■□□□ 1.98
PPP4R4-202ENST00000328839 PJA1Q8NG27 643 aa27.44■■□□□ 1.98
PPP4R4-202ENST00000328839 SNX27Q96L92 541 aa27.44■■□□□ 1.98
PPP4R4-202ENST00000328839 ACAP3Q96P50 834 aa27.44■■□□□ 1.98
PPP4R4-202ENST00000328839 PTPRHQ9HD43 1115 aa27.44■■□□□ 1.98
PPP4R4-202ENST00000328839 MRPS23Q9Y3D9 190 aaKnown RBP27.44■■□□□ 1.98
PPP4R4-202ENST00000328839 RBM19Q9Y4C8 960 aaKnown RBP27.44■■□□□ 1.98
PPP4R4-202ENST00000328839 R4GN57 208 aa27.44■■□□□ 1.98
PPP4R4-202ENST00000328839 SFI1A8K8P3 1242 aa27.43■■□□□ 1.98
PPP4R4-202ENST00000328839 MCF2P10911 925 aa27.43■■□□□ 1.98
PPP4R4-202ENST00000328839 ELF1P32519 619 aa27.43■■□□□ 1.98
PPP4R4-202ENST00000328839 RAD51AP2Q09MP3 1159 aa27.43■■□□□ 1.98
PPP4R4-202ENST00000328839 IL17AQ16552 155 aa27.43■■□□□ 1.98
PPP4R4-202ENST00000328839 MCTP1Q6DN14 999 aa27.43■■□□□ 1.98
PPP4R4-202ENST00000328839 MPZL3Q6UWV2 235 aa27.43■■□□□ 1.98
PPP4R4-202ENST00000328839 ALKAL1Q6UXT8 129 aa27.43■■□□□ 1.98
PPP4R4-202ENST00000328839 KCNK18Q7Z418 384 aa27.43■■□□□ 1.98
PPP4R4-202ENST00000328839 NPAS3Q8IXF0 933 aa27.43■■□□□ 1.98
PPP4R4-202ENST00000328839 ZMAT2Q96NC0 199 aaKnown RBP27.43■■□□□ 1.98
PPP4R4-202ENST00000328839 KCNH3Q9ULD8 1083 aa27.43■■□□□ 1.98
PPP4R4-202ENST00000328839 NUB1Q9Y5A7 615 aa27.43■■□□□ 1.98
PPP4R4-202ENST00000328839 PRRG1O14668 218 aa27.42■■□□□ 1.98
PPP4R4-202ENST00000328839 LRG1P02750 347 aa27.42■■□□□ 1.98
PPP4R4-202ENST00000328839 PRPHP41219 470 aa27.42■■□□□ 1.98
PPP4R4-202ENST00000328839 STARD6P59095 220 aa27.42■■□□□ 1.98
PPP4R4-202ENST00000328839 ROR1Q01973 937 aa27.42■■□□□ 1.98
PPP4R4-202ENST00000328839 MAPK7Q13164 816 aa27.42■■□□□ 1.98
PPP4R4-202ENST00000328839 XKR4Q5GH76 650 aa27.42■■□□□ 1.98
PPP4R4-202ENST00000328839 VARS2Q5ST30 1063 aaKnown RBP27.42■■□□□ 1.98
PPP4R4-202ENST00000328839 C1orf186Q6ZWK4 172 aa27.42■■□□□ 1.98
PPP4R4-202ENST00000328839 RTL10Q7L3V2 364 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms