RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 GPD1LQ8N335 351 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 PGM2Q96G03 612 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 KLHL11Q9NVR0 708 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 CTNNAL1Q9UBT7 734 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 LYPLA2O95372 231 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 RARGP13631 454 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 CREB1P16220 341 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 CLEC16AQ2KHT3 1053 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 SEZ6Q53EL9 994 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 HERPUD2Q9BSE4 406 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 SLC40A1Q9NP59 571 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 ANKEF1Q9NU02 776 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 ANKFY1Q9P2R3 1169 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 GSTTP1A0A1W2PQM5 241 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 SFNP31947 248 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 PIK3CAP42336 1068 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 SIX1Q15475 284 aaPredicted RBP15□□□□□ -0.01
ATP2C1-201ENST00000328560 DALRD3Q5D0E6 543 aaKnown RBP15□□□□□ -0.01
ATP2C1-201ENST00000328560 MORC4Q8TE76 937 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 TMEM143Q96AN5 459 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 HVCN1Q96D96 273 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 IFT74Q96LB3 600 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 PAGR1Q9BTK6 254 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 CD248Q9HCU0 757 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 SAMD15Q9P1V8 674 aa15□□□□□ -0.01
ATP2C1-201ENST00000328560 BRWD3Q6RI45 1802 aa14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 KIF13BQ9NQT8 1826 aa14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 AUHQ13825 339 aaKnown RBP14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 KAZNQ674X7 775 aa14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 DDX1Q92499 740 aaKnown RBP14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 ART4Q93070 314 aa14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 SCLT1Q96NL6 688 aa14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 POLR3FQ9H1D9 316 aaPredicted RBP14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 R3HDM2Q9Y2K5 976 aaKnown RBP14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 SRRM3A6NNA2 597 aaPredicted RBP14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 AGTP01019 485 aa14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 CFHP08603 1231 aa14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 PAEPP09466 180 aa14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 GBP1P32455 592 aa14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 MMP13P45452 471 aa14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 ANKRD20A8PQ5CZ79 823 aa14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 GSTA5Q7RTV2 222 aa14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 ANKS4BQ8N8V4 417 aa14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 ARHGEF2Q92974 986 aaKnown RBP14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 ADAM7Q9H2U9 754 aa14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 ST6GALNAC4Q9H4F1 302 aa14.99□□□□□ -0.01
ATP2C1-201ENST00000328560 LRRIQ4A6NIV6 560 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 THAP12O43422 761 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 MTA2O94776 668 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 RALAP11233 206 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 CD58P19256 250 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 ITGA8P53708 1063 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 FAM133BQ5BKY9 247 aaKnown RBP14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 DCAF15Q66K64 600 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 SNRNP48Q6IEG0 339 aaKnown RBP14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 TMEM270Q6UE05 265 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 DEFB132Q7Z7B7 95 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 MCOLN2Q8IZK6 566 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 GDAP1Q8TB36 358 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 ATP6V0A1Q93050 837 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 ZBTB45Q96K62 511 aaPredicted RBP14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 KLC4Q9NSK0 619 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 PCDHB4Q9Y5E5 795 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 COL2A1P02458 1487 aaPredicted RBP14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 GRIN3BO60391 1043 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 ATF2P15336 505 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 HP1BP3Q5SSJ5 553 aaPredicted RBP14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 PSPC1Q8WXF1 523 aaKnown RBP14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 ZNF516Q92618 1163 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 RUNDC3BQ96NL0 473 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 CAMKK2Q96RR4 588 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 JPH2Q9BR39 696 aaPredicted RBP14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 VPS33BQ9H267 617 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 ANAPC5Q9UJX4 755 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 PI4K2BG5E9Z4 385 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 MAPK13O15264 365 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 GAS8O95995 478 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 HLA-DRAP01903 254 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 CCND2P30279 289 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 SCTRP47872 440 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 ZKSCAN8Q15776 578 aaPredicted RBP14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 BRDTQ58F21 947 aaPredicted RBP14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 ZNF365Q70YC5 407 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 TAOK1Q7L7X3 1001 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 FAM212AQ96EL1 285 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 MFSD14AQ96MC6 490 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 TIPINQ9BVW5 301 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 KIAA1683Q9H0B3 1180 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 STMN4Q9H169 189 aaPredicted RBP14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 COQ4Q9Y3A0 265 aa14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 ATXN2Q99700 1313 aaKnown RBP14.98□□□□□ -0.01
ATP2C1-201ENST00000328560 WNT7BP56706 349 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 PRKCEQ02156 737 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 SPDYCQ5MJ68 293 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 CYP4F22Q6NT55 531 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 SEPT14Q6ZU15 432 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 SAMD7Q7Z3H4 446 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 CEP57Q86XR8 500 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 CCDC60Q8IWA6 550 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms