RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 APBB1IPQ7Z5R6 666 aaPredicted RBP20.29■□□□□ 0.84
EXOSC3-201ENST00000327304 ABHD8Q96I13 439 aa20.29■□□□□ 0.84
EXOSC3-201ENST00000327304 NXF3Q9H4D5 531 aaKnown RBP20.29■□□□□ 0.84
EXOSC3-201ENST00000327304 NHEJ1Q9H9Q4 299 aaPredicted RBP20.29■□□□□ 0.84
EXOSC3-201ENST00000327304 HES2Q9Y543 173 aa20.29■□□□□ 0.84
EXOSC3-201ENST00000327304 SCN5AQ14524 2016 aa20.29■□□□□ 0.84
EXOSC3-201ENST00000327304 ALPK3Q96L96 1907 aa20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 LRRC53A6NM62 1247 aa20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 EIF3CLB5ME19 914 aaKnown RBP20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 MEFVO15553 781 aaPredicted RBP20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 CLTAP09496 248 aa20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 GTF2F1P35269 517 aaKnown RBP eCLIP20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 GRM5P41594 1212 aa20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 KRT83P78385 493 aa20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 HSP90AA2PQ14568 343 aaPredicted RBP20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 PSMD6Q15008 389 aa20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 PARD3BQ8TEW8 1205 aa20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 EIF3CQ99613 913 aaKnown RBP20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 CRACR2AQ9BSW2 395 aa20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 TRIM6Q9C030 488 aaPredicted RBP20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 GANQ9H2C0 597 aa20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 PDE11AQ9HCR9 933 aa20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 PRDM5Q9NQX1 630 aaPredicted RBP20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 TOPORSQ9NS56 1045 aaPredicted RBP20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 FBXL5Q9UKA1 691 aa20.28■□□□□ 0.84
EXOSC3-201ENST00000327304 TRIM43BA6NCK2 446 aa20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 LRRIQ3A6PVS8 624 aaPredicted RBP20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 CXCL8P10145 99 aa20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 MCCD1P59942 119 aaPredicted RBP20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 ZNF662Q6ZS27 426 aa20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 ACRBPQ8NEB7 543 aa20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 TMC2Q8TDI7 906 aa20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 TRIM43Q96BQ3 446 aaPredicted RBP20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 FAM84AQ96KN4 292 aa20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 POP1Q99575 1024 aaKnown RBP20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 SNTG2Q9NY99 539 aa20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 PCDH10Q9P2E7 1040 aa20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 RIOK3O14730 519 aaKnown RBP20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 DLATP10515 647 aaKnown RBP20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 ZSCAN20P17040 1043 aaPredicted RBP20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 PON1P27169 355 aa20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 POLR2FP61218 127 aaKnown RBP20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 KYAT1Q16773 422 aa20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 DPY19L2P1Q6NXN4 242 aa20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 SMG8Q8ND04 991 aaKnown RBP20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 FAM212AQ96EL1 285 aa20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 ADAM2Q99965 735 aa20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 RPF1Q9H9Y2 349 aaKnown RBP20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 IPPQ9Y573 584 aa20.27■□□□□ 0.84
EXOSC3-201ENST00000327304 UQCRHLA0A096LP55 91 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 KIAA0355O15063 1070 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 UQCRHP07919 91 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 ITGB8P26012 769 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 PPP3CAQ08209 521 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 TCTN1Q2MV58 587 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 PLEKHG4Q58EX7 1191 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 LMBRD2Q68DH5 695 aaPredicted RBP20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 LINC01599Q8WXQ3 324 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 CCDC42Q96M95 316 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 CCDC94Q9BW85 323 aaPredicted RBP20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 APOL6Q9BWW8 343 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 RNF39Q9H2S5 420 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 FAM105AQ9NUU6 356 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 DNAI1Q9UI46 699 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 MYO6Q9UM54 1294 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 DAAM1Q9Y4D1 1078 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 PCDHB2Q9Y5E7 798 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 TET1Q8NFU7 2136 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 PTPRJQ12913 1337 aa20.26■□□□□ 0.83
EXOSC3-201ENST00000327304 SSU72P8A0A1W2PR75 194 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 IPO7O95373 1038 aaKnown RBP20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 FMO5P49326 533 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 SLC10A6Q3KNW5 377 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 ARHGAP29Q52LW3 1261 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 KLHDC7AQ5VTJ3 777 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 DBF4BQ8NFT6 615 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 ACAP3Q96P50 834 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 NLRC4Q9NPP4 1024 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 ARHGAP20Q9P2F6 1191 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 REXO2Q9Y3B8 237 aaKnown RBP20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 ANK1P16157 1881 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 CXCL10P02778 98 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 SLC9A1P19634 815 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 AKAP5P24588 427 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 GCLMP48507 274 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 MAPK8IP2Q13387 824 aaPredicted RBP20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 CBWD6Q4V339 395 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 CBWD3Q5JTY5 395 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 CBWD5Q5RIA9 395 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 SFMBT2Q5VUG0 894 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 RTN4RL1Q86UN2 441 aaPredicted RBP20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 FNBP1Q96RU3 617 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 CXCL16Q9H2A7 254 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 LZTFL1Q9NQ48 299 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 AIPL1Q9NZN9 384 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 MYO1AQ9UBC5 1043 aa20.25■□□□□ 0.83
EXOSC3-201ENST00000327304 LACTBL1A8MY62 500 aa20.24■□□□□ 0.83
EXOSC3-201ENST00000327304 KIF5CO60282 957 aa20.24■□□□□ 0.83
EXOSC3-201ENST00000327304 RECQL4O94761 1208 aa20.24■□□□□ 0.83
EXOSC3-201ENST00000327304 LCA5LO95447 670 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms