RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 SPOPLQ6IQ16 392 aa16.53■□□□□ 0.24
PRPF3-201ENST00000324862 AGMOQ6ZNB7 445 aa16.53■□□□□ 0.24
PRPF3-201ENST00000324862 NLRC4Q9NPP4 1024 aa16.53■□□□□ 0.24
PRPF3-201ENST00000324862 CSF2RAP15509 400 aa16.52■□□□□ 0.24
PRPF3-201ENST00000324862 EPC2Q52LR7 807 aa16.52■□□□□ 0.24
PRPF3-201ENST00000324862 GBP6Q6ZN66 633 aa16.52■□□□□ 0.24
PRPF3-201ENST00000324862 KIF12Q96FN5 646 aa16.52■□□□□ 0.24
PRPF3-201ENST00000324862 GAD1Q99259 594 aa16.52■□□□□ 0.24
PRPF3-201ENST00000324862 TTYH3Q9C0H2 523 aa16.52■□□□□ 0.24
PRPF3-201ENST00000324862 GOLGA2P5Q9HBQ8 144 aa16.52■□□□□ 0.24
PRPF3-201ENST00000324862 MIOSQ9NXC5 875 aa16.52■□□□□ 0.24
PRPF3-201ENST00000324862 TUBGCP4Q9UGJ1 667 aa16.52■□□□□ 0.24
PRPF3-201ENST00000324862 A0A0U1RQF3 1178 aa16.51■□□□□ 0.23
PRPF3-201ENST00000324862 PNMA6AP0CW24 399 aaPredicted RBP16.51■□□□□ 0.23
PRPF3-201ENST00000324862 PHLDB3Q6NSJ2 640 aa16.51■□□□□ 0.23
PRPF3-201ENST00000324862 ALKAL1Q6UXT8 129 aa16.51■□□□□ 0.23
PRPF3-201ENST00000324862 TRAPPC11Q7Z392 1133 aa16.51■□□□□ 0.23
PRPF3-201ENST00000324862 WDR49Q8IV35 697 aa16.51■□□□□ 0.23
PRPF3-201ENST00000324862 GSTCDQ8NEC7 633 aa16.51■□□□□ 0.23
PRPF3-201ENST00000324862 KAT5Q92993 513 aa16.51■□□□□ 0.23
PRPF3-201ENST00000324862 CCDC51Q96ER9 411 aa16.51■□□□□ 0.23
PRPF3-201ENST00000324862 INTS2Q9H0H0 1204 aaKnown RBP16.51■□□□□ 0.23
PRPF3-201ENST00000324862 PTMAP06454 111 aaKnown RBP16.51■□□□□ 0.23
PRPF3-201ENST00000324862 IGFBP6P24592 240 aaPredicted RBP16.51■□□□□ 0.23
PRPF3-201ENST00000324862 YARSP54577 528 aaKnown RBP16.51■□□□□ 0.23
PRPF3-201ENST00000324862 RRAGAQ7L523 313 aa16.51■□□□□ 0.23
PRPF3-201ENST00000324862 ARHGEF19Q8IW93 802 aa16.51■□□□□ 0.23
PRPF3-201ENST00000324862 C1orf127Q8N9H9 656 aa16.51■□□□□ 0.23
PRPF3-201ENST00000324862 RGS18Q9NS28 235 aa16.51■□□□□ 0.23
PRPF3-201ENST00000324862 FHOD1Q9Y613 1164 aa16.51■□□□□ 0.23
PRPF3-201ENST00000324862 ITIH6Q6UXX5 1313 aa16.51■□□□□ 0.23
PRPF3-201ENST00000324862 SMIM28A0A1B0GU29 152 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 C9IYK1 514 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 PTGESO14684 152 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 PPEF2O14830 753 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 HLA-DRAP01903 254 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 TMEM191BP0C7N4 346 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 ACRP10323 421 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 ITGA4P13612 1032 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 POLR2FP61218 127 aaKnown RBP16.5■□□□□ 0.23
PRPF3-201ENST00000324862 USP37Q86T82 979 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 ECHDC2Q86YB7 292 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 FBXL13Q8NEE6 735 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 RABGGTAQ92696 567 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 TATDN2Q93075 761 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 ABHD8Q96I13 439 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 GANQ9H2C0 597 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 RAB20Q9NX57 234 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 SIX4Q9UIU6 781 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 ENPP3O14638 875 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 IL18RAPO95256 599 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 KRT19P08727 400 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 FGFR1P11362 822 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 RAG1P15918 1043 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 SYN1P17600 705 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 SOX4Q06945 474 aaPredicted RBP16.5■□□□□ 0.23
PRPF3-201ENST00000324862 TMEM132DQ14C87 1099 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 DUOXA2Q1HG44 320 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 KLHDC7AQ5VTJ3 777 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 E4F1Q66K89 784 aaPredicted RBP16.5■□□□□ 0.23
PRPF3-201ENST00000324862 TMCO2Q7Z6W1 182 aaPredicted RBP16.5■□□□□ 0.23
PRPF3-201ENST00000324862 TC2NQ8N9U0 490 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 EHBP1Q8NDI1 1231 aa16.5■□□□□ 0.23
PRPF3-201ENST00000324862 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.49■□□□□ 0.23
PRPF3-201ENST00000324862 PHACTR2O75167 634 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 CLSTN1O94985 981 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 TIMP1P01033 207 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 CXCL10P02778 98 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 ITGB3P05106 788 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 PIK3CAP42336 1068 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 MYL6P60660 151 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 APBB1IPQ7Z5R6 666 aaPredicted RBP16.49■□□□□ 0.23
PRPF3-201ENST00000324862 C7orf61Q8IZ16 206 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 NEK11Q8NG66 645 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 CXorf38Q8TB03 319 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 CACTINQ8WUQ7 758 aaKnown RBP16.49■□□□□ 0.23
PRPF3-201ENST00000324862 ARID3AQ99856 593 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 TSPYL2Q9H2G4 693 aaPredicted RBP16.49■□□□□ 0.23
PRPF3-201ENST00000324862 ASB7Q9H672 318 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 APOBEC3GQ9HC16 384 aaKnown RBP16.49■□□□□ 0.23
PRPF3-201ENST00000324862 CNTN3Q9P232 1028 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 INPP5FQ9Y2H2 1132 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 COQ4Q9Y3A0 265 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 ANK1P16157 1881 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 GTPBP10A4D1E9 387 aaKnown RBP16.49■□□□□ 0.23
PRPF3-201ENST00000324862 ARL5CA6NH57 179 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 CCDC85CA6NKD9 419 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 POMCP01189 267 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 UCHL3P15374 230 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 GTF2H1P32780 548 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 GATMP50440 423 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 SCNN1GP51170 649 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 NCOA4Q13772 614 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.49■□□□□ 0.23
PRPF3-201ENST00000324862 SLC24A5Q71RS6 500 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 ZNF598Q86UK7 904 aaKnown RBP16.49■□□□□ 0.23
PRPF3-201ENST00000324862 PPFIBP1Q86W92 1011 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 SEPT8Q92599 483 aa16.49■□□□□ 0.23
PRPF3-201ENST00000324862 KIAA0355O15063 1070 aa16.48■□□□□ 0.23
PRPF3-201ENST00000324862 KYAT1Q16773 422 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms