RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 EXD3Q8N9H8 876 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 RNF169Q8NCN4 708 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 TMEM40Q8WWA1 233 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 INTS4Q96HW7 963 aaKnown RBP7.49□□□□□ -1.21
CSTF3-201ENST00000323959 TMEM209Q96SK2 561 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 CHST12Q9NRB3 414 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 SUSD2Q9UGT4 822 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 POLQO75417 2590 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 RAB27AP51159 221 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 IGBP1P78318 339 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 PLCB2Q00722 1185 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 FCHO2Q0JRZ9 810 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 TTBK2Q6IQ55 1244 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 ZSCAN25Q6NSZ9 544 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 TXNDC11Q6PKC3 985 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 TSTD1Q8NFU3 115 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 SEPT1Q8WYJ6 367 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 INPP4AQ96PE3 977 aaPredicted RBP7.49□□□□□ -1.21
CSTF3-201ENST00000323959 GPR88Q9GZN0 384 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 CPNE5Q9HCH3 593 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 TLR7Q9NYK1 1049 aaKnown RBP7.49□□□□□ -1.21
CSTF3-201ENST00000323959 F5P12259 2224 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 FREM2Q5SZK8 3169 aa7.49□□□□□ -1.21
CSTF3-201ENST00000323959 K7ELQ4 463 aaPredicted RBP7.48□□□□□ -1.21
CSTF3-201ENST00000323959 K7ENP7 123 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 C1SP09871 688 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 DMC1Q14565 340 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 PRSS36Q5K4E3 855 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 INO80CQ6PI98 192 aaPredicted RBP7.48□□□□□ -1.21
CSTF3-201ENST00000323959 NFXL1Q6ZNB6 911 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 DBX2Q6ZNG2 339 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 HSCBQ8IWL3 235 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 TTPALQ9BTX7 342 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 RNF39Q9H2S5 420 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 PAG1Q9NWQ8 432 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 MARCH5Q9NX47 278 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 CNTNAP2Q9UHC6 1331 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 FAM149AA5PLN7 773 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 SLC38A8A6NNN8 435 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 TRIM6-TRIM34B2RNG4 842 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 TRDMT1O14717 391 aaKnown RBP7.48□□□□□ -1.21
CSTF3-201ENST00000323959 PPFIA2O75334 1257 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 DRD1P21728 446 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 SLC16A2P36021 539 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 P2RY2P41231 377 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 GRM4Q14833 912 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 MARCH9Q86YJ5 346 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 OXER1Q8TDS5 423 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 TSC1Q92574 1164 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 TTC14Q96N46 770 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 FAM193BQ96PV7 902 aaPredicted RBP7.48□□□□□ -1.21
CSTF3-201ENST00000323959 DIAPH3Q9NSV4 1193 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 TMEM74BQ9NUR3 256 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 OBP2AQ9NY56 170 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 DNAJB4Q9UDY4 337 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 DOCK5Q9H7D0 1870 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 OFD1O75665 1012 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 RHOP08100 348 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 HOXB4P17483 251 aaPredicted RBP7.48□□□□□ -1.21
CSTF3-201ENST00000323959 PTPN2P17706 415 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 ADD2P35612 726 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 SPIRE1Q08AE8 756 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 UBE3CQ15386 1083 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 USP41Q3LFD5 358 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 FSTL4Q6MZW2 842 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 SLC36A4Q6YBV0 504 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.48□□□□□ -1.21
CSTF3-201ENST00000323959 LEMD2Q8NC56 503 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 PGBD4Q96DM1 585 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 CSRNP2Q9H175 543 aa7.48□□□□□ -1.21
CSTF3-201ENST00000323959 LRRK2Q5S007 2527 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 A0A1W2PQD8 194 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 NRP1O14786 923 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 BRINP1O60477 761 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 ITGB2P05107 769 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 SLC3A2P08195 630 aaKnown RBP7.47□□□□□ -1.21
CSTF3-201ENST00000323959 KRT32Q14532 448 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 ALX1Q15699 326 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 MCMDC2Q4G0Z9 681 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 DHX40Q8IX18 779 aaKnown RBP7.47□□□□□ -1.21
CSTF3-201ENST00000323959 KIAA0319LQ8IZA0 1049 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 SETD7Q8WTS6 366 aaKnown RBP7.47□□□□□ -1.21
CSTF3-201ENST00000323959 LPIN3Q9BQK8 851 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 FAM124BQ9H5Z6 455 aaPredicted RBP7.47□□□□□ -1.21
CSTF3-201ENST00000323959 ZSWIM6Q9HCJ5 1215 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 U3KPZ7 1027 aaPredicted RBP7.47□□□□□ -1.21
CSTF3-201ENST00000323959 NF1P21359 2839 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 LAMA5O15230 3695 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 RNF113AO15541 343 aaKnown RBP7.47□□□□□ -1.21
CSTF3-201ENST00000323959 FAM155BO75949 473 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 ALDH1A2O94788 518 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 DDAH2O95865 285 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 ITGB6P18564 788 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 AMPD2Q01433 879 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 VPS53Q5VIR6 699 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 SRRM1Q8IYB3 904 aaKnown RBP7.47□□□□□ -1.21
CSTF3-201ENST00000323959 TBC1D5Q92609 795 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 GPKOWQ92917 476 aaPredicted RBP eCLIP7.47□□□□□ -1.21
CSTF3-201ENST00000323959 RILPL2Q969X0 211 aa7.47□□□□□ -1.21
CSTF3-201ENST00000323959 MTA3Q9BTC8 594 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms