RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 FAM49BQ9NUQ9 324 aa18.09■□□□□ 0.49
PPP3CA-201ENST00000323055 ORC1Q13415 861 aa18.09■□□□□ 0.49
PPP3CA-201ENST00000323055 NPY5RQ15761 445 aa18.09■□□□□ 0.49
PPP3CA-201ENST00000323055 MAP7D1Q3KQU3 841 aa18.09■□□□□ 0.49
PPP3CA-201ENST00000323055 MAP1SQ66K74 1059 aaPredicted RBP18.09■□□□□ 0.49
PPP3CA-201ENST00000323055 KIAA1841Q6NSI8 718 aa18.09■□□□□ 0.49
PPP3CA-201ENST00000323055 GPAT2Q6NUI2 795 aa18.09■□□□□ 0.49
PPP3CA-201ENST00000323055 SPATA20Q8TB22 786 aa18.09■□□□□ 0.49
PPP3CA-201ENST00000323055 RRP15Q9Y3B9 282 aaKnown RBP18.09■□□□□ 0.49
PPP3CA-201ENST00000323055 BRD2P25440 801 aaKnown RBP18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 CDK17Q00537 523 aa18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 MTM1Q13496 603 aa18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 CCDC38Q502W7 563 aa18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 SYCP2LQ5T4T6 812 aa18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 SPOPLQ6IQ16 392 aa18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 SH3BP5LQ7L8J4 393 aa18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 MTMR12Q9C0I1 747 aa18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 DHX35Q9H5Z1 703 aaKnown RBP18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 PSMD10O75832 226 aa18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 SUN1O94901 812 aa18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 CYP3A4P08684 503 aa18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 CETPP11597 493 aa18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 ITGB5P18084 799 aa18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 RWDD4Q6NW29 188 aaKnown RBP18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 RNF139Q8WU17 664 aa18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 PARK7Q99497 189 aaKnown RBP18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 SMYD2Q9NRG4 433 aa18.08■□□□□ 0.49
PPP3CA-201ENST00000323055 CREB3O43889 395 aa18.08■□□□□ 0.48
PPP3CA-201ENST00000323055 BCAR1P56945 870 aa18.08■□□□□ 0.48
PPP3CA-201ENST00000323055 SNRPFP62306 86 aaKnown RBP18.08■□□□□ 0.48
PPP3CA-201ENST00000323055 SMAD1Q15797 465 aaKnown RBP18.08■□□□□ 0.48
PPP3CA-201ENST00000323055 NUGGCQ68CJ6 796 aa18.08■□□□□ 0.48
PPP3CA-201ENST00000323055 CLTAP09496 248 aa18.08■□□□□ 0.48
PPP3CA-201ENST00000323055 SNHG28P0DPA3 235 aa18.08■□□□□ 0.48
PPP3CA-201ENST00000323055 CYP2C9P11712 490 aa18.08■□□□□ 0.48
PPP3CA-201ENST00000323055 IRX4P78413 519 aa18.08■□□□□ 0.48
PPP3CA-201ENST00000323055 RBP5P82980 135 aa18.08■□□□□ 0.48
PPP3CA-201ENST00000323055 IZUMO3Q5VZ72 239 aa18.08■□□□□ 0.48
PPP3CA-201ENST00000323055 NIF3L1Q9GZT8 377 aa18.08■□□□□ 0.48
PPP3CA-201ENST00000323055 CRCPO75575 148 aa18.07■□□□□ 0.48
PPP3CA-201ENST00000323055 C1orf228Q6PIY5 440 aa18.07■□□□□ 0.48
PPP3CA-201ENST00000323055 C1orf186Q6ZWK4 172 aa18.07■□□□□ 0.48
PPP3CA-201ENST00000323055 TTC13Q8NBP0 860 aa18.07■□□□□ 0.48
PPP3CA-201ENST00000323055 OPTNQ96CV9 577 aa18.07■□□□□ 0.48
PPP3CA-201ENST00000323055 PRMT7Q9NVM4 692 aaPredicted RBP18.07■□□□□ 0.48
PPP3CA-201ENST00000323055 LCP1P13796 627 aa18.07■□□□□ 0.48
PPP3CA-201ENST00000323055 PDGFRAP16234 1089 aa18.07■□□□□ 0.48
PPP3CA-201ENST00000323055 GTF2A1P52655 376 aaPredicted RBP18.07■□□□□ 0.48
PPP3CA-201ENST00000323055 DHX34Q14147 1143 aaKnown RBP18.07■□□□□ 0.48
PPP3CA-201ENST00000323055 LRRC55Q6ZSA7 311 aa18.07■□□□□ 0.48
PPP3CA-201ENST00000323055 SCYL1Q96KG9 808 aa18.07■□□□□ 0.48
PPP3CA-201ENST00000323055 CNOT10Q9H9A5 744 aaKnown RBP18.07■□□□□ 0.48
PPP3CA-201ENST00000323055 SDCCAG8Q86SQ7 713 aaPredicted RBP18.07■□□□□ 0.48
PPP3CA-201ENST00000323055 SLC47A2Q86VL8 602 aa18.07■□□□□ 0.48
PPP3CA-201ENST00000323055 CALR3Q96L12 384 aaKnown RBP18.07■□□□□ 0.48
PPP3CA-201ENST00000323055 FRMPD4Q14CM0 1322 aa18.07■□□□□ 0.48
PPP3CA-201ENST00000323055 RASA4BC9J798 803 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 RASA4O43374 803 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 GLRA4Q5JXX5 417 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 CYP11B1P15538 503 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 NAMPTP43490 491 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 ARSEP51690 589 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 ARL4CP56559 192 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 NME3Q13232 169 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 LAMC2Q13753 1193 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 ACSF2Q96CM8 615 aaPredicted RBP18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 DBR1Q9UK59 544 aaKnown RBP18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 SETD1AO15047 1707 aaKnown RBP18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 OGTO15294 1046 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 ASAP2O43150 1006 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 ATP9AO75110 1047 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 ITGB3P05106 788 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 CUL2Q13617 745 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 SMTNL2Q2TAL5 461 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 CYP4A22Q5TCH4 519 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 PAPD7Q5XG87 772 aaKnown RBP18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 TEX2Q8IWB9 1127 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 PLCD3Q8N3E9 789 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 C1orf131Q8NDD1 294 aaKnown RBP18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 UBA3Q8TBC4 463 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 ETNPPLQ8TBG4 499 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 TRAPPC12Q8WVT3 735 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 TATDN2Q93075 761 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 SENP7Q9BQF6 1050 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 IKZF4Q9H2S9 585 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 FNDC3AQ9Y2H6 1198 aaKnown RBP18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 RNF225M0QZC1 329 aaPredicted RBP18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 SPATA31C1P0DKV0 1188 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 DNAJC18Q9H819 358 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 GTF3C4Q9UKN8 822 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 SIK3Q9Y2K2 1263 aa18.06■□□□□ 0.48
PPP3CA-201ENST00000323055 SLC1A1P43005 524 aa18.05■□□□□ 0.48
PPP3CA-201ENST00000323055 CBWD6Q4V339 395 aa18.05■□□□□ 0.48
PPP3CA-201ENST00000323055 CBWD3Q5JTY5 395 aa18.05■□□□□ 0.48
PPP3CA-201ENST00000323055 CBWD5Q5RIA9 395 aa18.05■□□□□ 0.48
PPP3CA-201ENST00000323055 IRF2BP1Q8IU81 584 aa18.05■□□□□ 0.48
PPP3CA-201ENST00000323055 ZBED8Q8IZ13 594 aa18.05■□□□□ 0.48
PPP3CA-201ENST00000323055 MMGT1Q8N4V1 131 aa18.05■□□□□ 0.48
PPP3CA-201ENST00000323055 ELAC2Q9BQ52 826 aaKnown RBP18.05■□□□□ 0.48
PPP3CA-201ENST00000323055 VPS33BQ9H267 617 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms