RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 DHX34Q14147 1143 aaKnown RBP10.25□□□□□ -0.77
RPGR-201ENST00000318842 P3H1Q32P28 736 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 CDCA2Q69YH5 1023 aaPredicted RBP10.25□□□□□ -0.77
RPGR-201ENST00000318842 SH3BP5LQ7L8J4 393 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 HS2ST1Q7LGA3 356 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 CCDC33Q8N5R6 958 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 EFCAB3Q8N7B9 438 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 LXNQ9BS40 222 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 NSRP1Q9H0G5 558 aaKnown RBP10.25□□□□□ -0.77
RPGR-201ENST00000318842 ADRA1DP25100 572 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 POLE2P56282 527 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 ICA1Q05084 483 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 ZNF394Q53GI3 561 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 SLC10A5Q5PT55 438 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 IZUMO3Q5VZ72 239 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 FBXO11Q86XK2 927 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 CCNJLQ8IV13 435 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 NRG4Q8WWG1 115 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 C11orf70Q9BRQ4 267 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 TRIM56Q9BRZ2 755 aaKnown RBP10.25□□□□□ -0.77
RPGR-201ENST00000318842 GLIS2Q9BZE0 524 aaPredicted RBP10.25□□□□□ -0.77
RPGR-201ENST00000318842 FRMPD4Q14CM0 1322 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 SPATA31A1Q5TZJ5 1347 aa10.25□□□□□ -0.77
RPGR-201ENST00000318842 A0A0A6YYK5 440 aaPredicted RBP10.24□□□□□ -0.77
RPGR-201ENST00000318842 FAM187AA6NFU0 413 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 GAS7O60861 476 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 SMIM24O75264 130 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 USP1O94782 785 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 TTC4O95801 387 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 F7P08709 466 aaPredicted RBP10.24□□□□□ -0.77
RPGR-201ENST00000318842 CA4P22748 312 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 PEX3P56589 373 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 GRIK3Q13003 919 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 MAPK6Q16659 721 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 TMEM154Q6P9G4 183 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 TAOK1Q7L7X3 1001 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 WDR60Q8WVS4 1066 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 PTPRN2Q92932 1015 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 MKL1Q969V6 931 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 CENPTQ96BT3 561 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 CYTH2Q99418 400 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 SHCBP1LQ9BZQ2 653 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 RXFP1Q9HBX9 757 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 SLC17A7Q9P2U7 560 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 MARCOQ9UEW3 520 aaPredicted RBP10.24□□□□□ -0.77
RPGR-201ENST00000318842 NOCTQ9UK39 431 aaKnown RBP10.24□□□□□ -0.77
RPGR-201ENST00000318842 SYNGAP1Q96PV0 1343 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 TAF1LQ8IZX4 1826 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 IGKV6D-41A0A0C4DH26 115 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 CCDC195A0A1B0GUA6 201 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 EXOC1LA0A1B0GW35 172 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 F5H423 210 aaPredicted RBP10.24□□□□□ -0.77
RPGR-201ENST00000318842 PPP1R12AO14974 1030 aaPredicted RBP10.24□□□□□ -0.77
RPGR-201ENST00000318842 UNC5CO95185 931 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 ATF2P15336 505 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 GCAP28676 217 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 VAMP7P51809 220 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 MXRA7P84157 204 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 SPP2Q13103 211 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 PCNX4Q63HM2 1172 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 PPP4R3CPQ6ZMV5 832 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 ERMNQ8TAM6 284 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 SLC7A6OSQ96CW6 309 aaPredicted RBP10.24□□□□□ -0.77
RPGR-201ENST00000318842 RBM15Q96T37 977 aaKnown RBP eCLIP10.24□□□□□ -0.77
RPGR-201ENST00000318842 NKIRAS1Q9NYS0 192 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 MYH11P35749 1972 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 RAD17O75943 681 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 EYA4O95677 639 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 TOP3BO95985 862 aaKnown RBP10.24□□□□□ -0.77
RPGR-201ENST00000318842 KITP10721 976 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 HARSP12081 509 aaKnown RBP10.24□□□□□ -0.77
RPGR-201ENST00000318842 SSTR1P30872 391 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 MAPK4P31152 587 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 NEK3P51956 506 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 RASA3Q14644 834 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 KPNB1Q14974 876 aaKnown RBP10.24□□□□□ -0.77
RPGR-201ENST00000318842 UGCGQ16739 394 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 SMTNL2Q2TAL5 461 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 FOXB2Q5VYV0 432 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 OTOP1Q7RTM1 612 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 ARMC9Q7Z3E5 817 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 LRRC6Q86X45 466 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 FMNL3Q8IVF7 1028 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 ARMC2Q8NEN0 867 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 PSPC1Q8WXF1 523 aaKnown RBP10.24□□□□□ -0.77
RPGR-201ENST00000318842 CD101Q93033 1021 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 MAK16Q9BXY0 300 aaKnown RBP10.24□□□□□ -0.77
RPGR-201ENST00000318842 WDR11Q9BZH6 1224 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 METTL14Q9HCE5 456 aaKnown RBP10.24□□□□□ -0.77
RPGR-201ENST00000318842 PRKAG3Q9UGI9 489 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 PCYOX1Q9UHG3 505 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 GTF3C4Q9UKN8 822 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 BPTFQ12830 3046 aa10.24□□□□□ -0.77
RPGR-201ENST00000318842 SORBS2O94875 1100 aaKnown RBP10.23□□□□□ -0.77
RPGR-201ENST00000318842 PLS3P13797 630 aa10.23□□□□□ -0.77
RPGR-201ENST00000318842 CYP11B1P15538 503 aa10.23□□□□□ -0.77
RPGR-201ENST00000318842 GMPRP36959 345 aa10.23□□□□□ -0.77
RPGR-201ENST00000318842 RWDD2BP57060 319 aa10.23□□□□□ -0.77
RPGR-201ENST00000318842 SARNPP82979 210 aaKnown RBP10.23□□□□□ -0.77
RPGR-201ENST00000318842 ZBED8Q8IZ13 594 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms