RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 LRRC27Q9C0I9 530 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 VPS11Q9H270 941 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 MANSC1Q9H8J5 431 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 CERS4Q9HA82 394 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 GPRC5DQ9NZD1 345 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 FBXO10Q9UK96 956 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 PCDHGB2Q9Y5G2 931 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 NAIPQ13075 1403 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 AKNAQ7Z591 1439 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 PHGDHO43175 533 aaKnown RBP4.91□□□□□ -1.62
SMCO3-201ENST00000316048 PHF2O75151 1096 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 SBK3P0C264 359 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 BRAFP15056 766 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 ALDH1A3P47895 512 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 MRE11P49959 708 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 PMS2P11Q13670 270 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 ZRSR2Q15696 482 aaKnown RBP4.91□□□□□ -1.62
SMCO3-201ENST00000316048 TBR1Q16650 682 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 FLYWCH1Q4VC44 716 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 FAM209BQ5JX69 171 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 CCDC174Q6PII3 467 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 GADL1Q6ZQY3 521 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 RTKN2Q8IZC4 609 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 ADGRG2Q8IZP9 1017 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 ANKRD42Q8N9B4 389 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 ACRBPQ8NEB7 543 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 MYRIPQ8NFW9 859 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 PAWRQ96IZ0 340 aaKnown RBP4.91□□□□□ -1.62
SMCO3-201ENST00000316048 MRGPRX1Q96LB2 322 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 WRNIP1Q96S55 665 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 P2RX7Q99572 595 aaKnown RBP4.91□□□□□ -1.62
SMCO3-201ENST00000316048 MYOCQ99972 504 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.91□□□□□ -1.62
SMCO3-201ENST00000316048 SENP6Q9GZR1 1112 aaPredicted RBP4.91□□□□□ -1.62
SMCO3-201ENST00000316048 BCO1Q9HAY6 547 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 TRMT13Q9NUP7 481 aaKnown RBP4.91□□□□□ -1.62
SMCO3-201ENST00000316048 MORC2Q9Y6X9 1032 aaPredicted RBP4.91□□□□□ -1.62
SMCO3-201ENST00000316048 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.91□□□□□ -1.62
SMCO3-201ENST00000316048 ROCK1Q13464 1354 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 ITSN2Q9NZM3 1697 aa4.91□□□□□ -1.62
SMCO3-201ENST00000316048 TEX51A0A1B0GUA7 166 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 F2RL2O00254 374 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 DDX3XO00571 662 aaKnown RBP eCLIP4.9□□□□□ -1.62
SMCO3-201ENST00000316048 PEX10O60683 326 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 TOX4O94842 621 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 ITGB5P18084 799 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 PHKA1P46020 1223 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 STT3AP46977 705 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 FMO1Q01740 532 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 DLX2Q07687 328 aaPredicted RBP4.9□□□□□ -1.62
SMCO3-201ENST00000316048 MAN2A1Q16706 1144 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 C19orf54Q5BKX5 351 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 FAM180AQ6UWF9 173 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 CCDC33Q8N5R6 958 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 TTLL6Q8N841 843 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 FNIP1Q8TF40 1166 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 MTFMTQ96DP5 389 aaKnown RBP4.9□□□□□ -1.62
SMCO3-201ENST00000316048 WDR12Q9GZL7 423 aaKnown RBP4.9□□□□□ -1.62
SMCO3-201ENST00000316048 BTBD1Q9H0C5 482 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 ADAM7Q9H2U9 754 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 EPB41L4AQ9HCS5 686 aaPredicted RBP4.9□□□□□ -1.62
SMCO3-201ENST00000316048 LANCL2Q9NS86 450 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 GJB4Q9NTQ9 266 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.9□□□□□ -1.62
SMCO3-201ENST00000316048 FEZ2Q9UHY8 353 aaPredicted RBP4.9□□□□□ -1.62
SMCO3-201ENST00000316048 PCDHGB3Q9Y5G1 929 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 PMF1-BGLAPU3KQ54 211 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 ZMYM3Q14202 1370 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 DAPK1P53355 1430 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 GPATCH8Q9UKJ3 1502 aaKnown RBP4.9□□□□□ -1.62
SMCO3-201ENST00000316048 ADCY10Q96PN6 1610 aa4.9□□□□□ -1.62
SMCO3-201ENST00000316048 FRS3O43559 492 aa4.9□□□□□ -1.63
SMCO3-201ENST00000316048 MAPKBP1O60336 1514 aa4.9□□□□□ -1.63
SMCO3-201ENST00000316048 RPLP2P05387 115 aaKnown RBP4.9□□□□□ -1.63
SMCO3-201ENST00000316048 CD1AP06126 327 aa4.9□□□□□ -1.63
SMCO3-201ENST00000316048 TSPY4P0CV99 314 aa4.9□□□□□ -1.63
SMCO3-201ENST00000316048 TSPY10P0CW01 314 aa4.9□□□□□ -1.63
SMCO3-201ENST00000316048 HDCP19113 662 aa4.9□□□□□ -1.63
SMCO3-201ENST00000316048 PTPN7P35236 360 aa4.9□□□□□ -1.63
SMCO3-201ENST00000316048 PPM1AP35813 382 aa4.9□□□□□ -1.63
SMCO3-201ENST00000316048 SUMO3P55854 103 aaPredicted RBP4.9□□□□□ -1.63
SMCO3-201ENST00000316048 EXOSC9Q06265 439 aaKnown RBP4.9□□□□□ -1.63
SMCO3-201ENST00000316048 RAB39AQ14964 217 aa4.9□□□□□ -1.63
SMCO3-201ENST00000316048 MLANAQ16655 118 aa4.9□□□□□ -1.63
SMCO3-201ENST00000316048 C3orf38Q5JPI3 329 aa4.9□□□□□ -1.63
SMCO3-201ENST00000316048 ARTNQ5T4W7 220 aa4.9□□□□□ -1.63
SMCO3-201ENST00000316048 RNF152Q8N8N0 203 aa4.9□□□□□ -1.63
SMCO3-201ENST00000316048 PLA2G15Q8NCC3 412 aa4.9□□□□□ -1.63
SMCO3-201ENST00000316048 SIN3AQ96ST3 1273 aa4.9□□□□□ -1.63
SMCO3-201ENST00000316048 ZNF644Q9H582 1327 aaPredicted RBP4.9□□□□□ -1.63
SMCO3-201ENST00000316048 LUZP4Q9P127 313 aa4.9□□□□□ -1.63
SMCO3-201ENST00000316048 CTDP1Q9Y5B0 961 aaPredicted RBP4.9□□□□□ -1.63
SMCO3-201ENST00000316048 KIF14Q15058 1648 aa4.89□□□□□ -1.63
SMCO3-201ENST00000316048 ABCC5O15440 1437 aa4.89□□□□□ -1.63
SMCO3-201ENST00000316048 DAPK3O43293 454 aa4.89□□□□□ -1.63
SMCO3-201ENST00000316048 PRDX5P30044 214 aa4.89□□□□□ -1.63
SMCO3-201ENST00000316048 CASRP41180 1078 aa4.89□□□□□ -1.63
SMCO3-201ENST00000316048 KIR2DL3P43628 341 aa4.89□□□□□ -1.63
SMCO3-201ENST00000316048 CNGA2Q16280 664 aa4.89□□□□□ -1.63
SMCO3-201ENST00000316048 KHDC1LQ5JSQ8 128 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms