RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 SIAEQ9HAT2 523 aa9.85□□□□□ -0.83
BDNF-201ENST00000314915 CLEC11AQ9Y240 323 aa9.85□□□□□ -0.83
BDNF-201ENST00000314915 CROCC2H7BZ55 1655 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 KDM5AP29375 1690 aaKnown RBP9.84□□□□□ -0.83
BDNF-201ENST00000314915 H7C0C1 242 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 KRT36O76013 467 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 EEF2P13639 858 aaKnown RBP9.84□□□□□ -0.83
BDNF-201ENST00000314915 ATF6P18850 670 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 PIP4K2AP48426 406 aaPredicted RBP9.84□□□□□ -0.83
BDNF-201ENST00000314915 VCPP55072 806 aaKnown RBP9.84□□□□□ -0.83
BDNF-201ENST00000314915 MARSP56192 900 aaKnown RBP9.84□□□□□ -0.83
BDNF-201ENST00000314915 HERVK_113P62684 666 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 KRT81Q14533 505 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 NECTIN1Q15223 517 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 TRAPPC3LQ5T215 181 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 NOSTRINQ8IVI9 506 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 FAM9CQ8IZT9 166 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 NRBF2Q96F24 287 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 RBM14Q96PK6 669 aaKnown RBP9.84□□□□□ -0.83
BDNF-201ENST00000314915 PHF20Q9BVI0 1012 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 KLHL25Q9H0H3 589 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 CDH19Q9H159 772 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 IFT22Q9H7X7 185 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 ZNF287Q9HBT7 754 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 WASH6PQ9NQA3 447 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 EMILIN3Q9NT22 766 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 TUBGCP6Q96RT7 1819 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 CARMIL3Q8ND23 1372 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 KPNA4O00629 521 aaPredicted RBP9.84□□□□□ -0.83
BDNF-201ENST00000314915 RGS16O15492 202 aaPredicted RBP9.84□□□□□ -0.83
BDNF-201ENST00000314915 SLC5A2P31639 672 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 ENTPD1P49961 510 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 SCFD1Q8WVM8 642 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 TRIM63Q969Q1 353 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 INPP4AQ96PE3 977 aaPredicted RBP9.84□□□□□ -0.83
BDNF-201ENST00000314915 NDE1Q9NXR1 346 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 PPP1R1BQ9UD71 204 aaPredicted RBP9.84□□□□□ -0.83
BDNF-201ENST00000314915 HAO1Q9UJM8 370 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 DCDC2CA8MYV0 355 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 UQCRBP14927 111 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 SPAG1Q07617 926 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 PNOCQ13519 176 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 NADK2Q4G0N4 442 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 CLVS2Q5SYC1 327 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 C6orf163Q5TEZ5 329 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 METTL3Q86U44 580 aaKnown RBP9.84□□□□□ -0.83
BDNF-201ENST00000314915 COL23A1Q86Y22 540 aaPredicted RBP9.84□□□□□ -0.83
BDNF-201ENST00000314915 DCP2Q8IU60 420 aaKnown RBP9.84□□□□□ -0.83
BDNF-201ENST00000314915 FAR2Q96K12 515 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 NAP1L4Q99733 375 aaKnown RBP9.84□□□□□ -0.83
BDNF-201ENST00000314915 ARMC7Q9H6L4 198 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 CABP2Q9NPB3 220 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 HPS5Q9UPZ3 1129 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 SBNO2Q9Y2G9 1366 aa9.84□□□□□ -0.83
BDNF-201ENST00000314915 NPHP3-ACAD11A0A0J9YXS1 232 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 TCP11X1B4DZS4 312 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 RNMTO43148 476 aaKnown RBP9.83□□□□□ -0.84
BDNF-201ENST00000314915 VCLP18206 1134 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 IARSP41252 1262 aaKnown RBP9.83□□□□□ -0.84
BDNF-201ENST00000314915 IFNAR2P48551 515 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 PLCD1P51178 756 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 RASSF3Q86WH2 238 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 TICAM1Q8IUC6 712 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 KBTBD2Q8IY47 623 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 CSGALNACT2Q8N6G5 542 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 FERMT1Q9BQL6 677 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 RSL24D1Q9UHA3 163 aaKnown RBP9.83□□□□□ -0.84
BDNF-201ENST00000314915 ATP6V1HQ9UI12 483 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 PCDHA5Q9Y5H7 936 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 TSPY2A6NKD2 308 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 DDX3XO00571 662 aaKnown RBP eCLIP9.83□□□□□ -0.84
BDNF-201ENST00000314915 NCK2O43639 380 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 RSL1D1O76021 490 aaKnown RBP9.83□□□□□ -0.84
BDNF-201ENST00000314915 PLEKHA8P1O95397 391 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 GAS8O95995 478 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 EGFRP00533 1210 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 TSPY3P0CV98 308 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 TSPY8P0CW00 308 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 RBP3P10745 1247 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 COL6A1P12109 1028 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 TRIM23P36406 574 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 GPD2P43304 727 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 TSPY1Q01534 308 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 C19orf57Q0VDD7 668 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 SPA17Q15506 151 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 TXNRD1Q16881 649 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 KIAA2013Q8IYS2 634 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 PLEKHA8Q96JA3 519 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 SAR1AQ9NR31 198 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 MAN1C1Q9NR34 630 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 PCDHA12Q9UN75 941 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 DNAJC6O75061 913 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 ZWINTO95229 277 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 PGM3O95394 542 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 PRKAR1BP31321 381 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 NR2C2P49116 596 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 YARSP54577 528 aaKnown RBP9.83□□□□□ -0.84
BDNF-201ENST00000314915 NR1H2P55055 460 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 TMC5Q6UXY8 1006 aa9.83□□□□□ -0.84
BDNF-201ENST00000314915 UNC5DQ6UXZ4 953 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms