RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 BUB1O43683 1085 aa18■□□□□ 0.47
CLCF1-201ENST00000312438 TSPAN1O60635 241 aa18■□□□□ 0.47
CLCF1-201ENST00000312438 SGPL1O95470 568 aa18■□□□□ 0.47
CLCF1-201ENST00000312438 C6orf222P0C671 652 aaPredicted RBP18■□□□□ 0.47
CLCF1-201ENST00000312438 IFI16Q16666 785 aaKnown RBP18■□□□□ 0.47
CLCF1-201ENST00000312438 WHAMMP3Q1A5X7 153 aa18■□□□□ 0.47
CLCF1-201ENST00000312438 ZNF710Q8N1W2 664 aa18■□□□□ 0.47
CLCF1-201ENST00000312438 CEP112Q8N8E3 955 aa18■□□□□ 0.47
CLCF1-201ENST00000312438 CEP120Q8N960 986 aa18■□□□□ 0.47
CLCF1-201ENST00000312438 CPB2Q96IY4 423 aa18■□□□□ 0.47
CLCF1-201ENST00000312438 IMPG2Q9BZV3 1241 aa18■□□□□ 0.47
CLCF1-201ENST00000312438 SPC25Q9HBM1 224 aa18■□□□□ 0.47
CLCF1-201ENST00000312438 A0A0A6YYK5 440 aaPredicted RBP17.99■□□□□ 0.47
CLCF1-201ENST00000312438 C17orf102A2RUQ5 167 aa17.99■□□□□ 0.47
CLCF1-201ENST00000312438 EFCAB8A8MWE9 144 aa17.99■□□□□ 0.47
CLCF1-201ENST00000312438 CST3P01034 146 aaPredicted RBP17.99■□□□□ 0.47
CLCF1-201ENST00000312438 STAG3L1P0CL83 205 aa17.99■□□□□ 0.47
CLCF1-201ENST00000312438 CYP11B1P15538 503 aa17.99■□□□□ 0.47
CLCF1-201ENST00000312438 PRLRP16471 622 aa17.99■□□□□ 0.47
CLCF1-201ENST00000312438 TBXAS1P24557 533 aaPredicted RBP17.99■□□□□ 0.47
CLCF1-201ENST00000312438 GNASQ5JWF2 1037 aa17.99■□□□□ 0.47
CLCF1-201ENST00000312438 SLC47A2Q86VL8 602 aa17.99■□□□□ 0.47
CLCF1-201ENST00000312438 RPUSD2Q8IZ73 545 aaKnown RBP17.99■□□□□ 0.47
CLCF1-201ENST00000312438 C7orf31Q8N865 590 aa17.99■□□□□ 0.47
CLCF1-201ENST00000312438 EPS8L1Q8TE68 723 aa17.99■□□□□ 0.47
CLCF1-201ENST00000312438 ADPGKQ9BRR6 497 aa17.99■□□□□ 0.47
CLCF1-201ENST00000312438 SEPT11Q9NVA2 429 aaKnown RBP17.99■□□□□ 0.47
CLCF1-201ENST00000312438 NOCTQ9UK39 431 aaKnown RBP17.99■□□□□ 0.47
CLCF1-201ENST00000312438 SEPT4O43236 478 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 TNNC2P02585 160 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 TMEM191BP0C7N4 346 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 TMEM253P0C7T8 217 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 GALCP54803 685 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 BPIFB4P59827 614 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 TFAMQ00059 246 aaKnown RBP17.98■□□□□ 0.47
CLCF1-201ENST00000312438 CUL2Q13617 745 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 HIC1Q14526 733 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 SGSM1Q2NKQ1 1148 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 RUFY4Q6ZNE9 571 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 NOP9Q86U38 636 aaKnown RBP17.98■□□□□ 0.47
CLCF1-201ENST00000312438 NME8Q8N427 588 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 SLC20A1Q8WUM9 679 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 DHX38Q92620 1227 aaKnown RBP17.98■□□□□ 0.47
CLCF1-201ENST00000312438 ELMO3Q96BJ8 720 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 ANKRD36BP1Q96IX9 119 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 CFHR5Q9BXR6 569 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 MTMR12Q9C0I1 747 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 APOBEC3GQ9HC16 384 aaKnown RBP17.98■□□□□ 0.47
CLCF1-201ENST00000312438 HDAC6Q9UBN7 1215 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 GINS2Q9Y248 185 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 PCDHGC5Q9Y5F6 944 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 DOCK3Q8IZD9 2030 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 TREHO43280 583 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 GZMAP12544 262 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 KRT5P13647 590 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 PDE6CP51160 858 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 NOP14P78316 857 aaKnown RBP17.98■□□□□ 0.47
CLCF1-201ENST00000312438 NKX3-2P78367 333 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 TMEM62Q0P6H9 643 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 TRPC3Q13507 836 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 SPOPLQ6IQ16 392 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 APBB1IPQ7Z5R6 666 aaPredicted RBP17.98■□□□□ 0.47
CLCF1-201ENST00000312438 DNAJB3Q8WWF6 145 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 MTG1Q9BT17 334 aaPredicted RBP17.98■□□□□ 0.47
CLCF1-201ENST00000312438 UPF3AQ9H1J1 476 aaKnown RBP17.98■□□□□ 0.47
CLCF1-201ENST00000312438 ISCUQ9H1K1 167 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 ASB7Q9H672 318 aa17.98■□□□□ 0.47
CLCF1-201ENST00000312438 ANKRD62A6NC57 917 aa17.97■□□□□ 0.47
CLCF1-201ENST00000312438 PALMO75781 387 aa17.97■□□□□ 0.47
CLCF1-201ENST00000312438 ASS1P00966 412 aaKnown RBP17.97■□□□□ 0.47
CLCF1-201ENST00000312438 CXCL8P10145 99 aa17.97■□□□□ 0.47
CLCF1-201ENST00000312438 RARBP10826 455 aa17.97■□□□□ 0.47
CLCF1-201ENST00000312438 DARSP14868 501 aaKnown RBP17.97■□□□□ 0.47
CLCF1-201ENST00000312438 CHRNB2P17787 502 aa17.97■□□□□ 0.47
CLCF1-201ENST00000312438 HOXD10P28358 340 aa17.97■□□□□ 0.47
CLCF1-201ENST00000312438 HOXC8P31273 242 aa17.97■□□□□ 0.47
CLCF1-201ENST00000312438 NOP2P46087 812 aaKnown RBP17.97■□□□□ 0.47
CLCF1-201ENST00000312438 CDR2Q01850 454 aa17.97■□□□□ 0.47
CLCF1-201ENST00000312438 CACNB2Q08289 660 aaPredicted RBP17.97■□□□□ 0.47
CLCF1-201ENST00000312438 NAA30Q147X3 362 aaPredicted RBP17.97■□□□□ 0.47
CLCF1-201ENST00000312438 SMYD5Q6GMV2 418 aa17.97■□□□□ 0.47
CLCF1-201ENST00000312438 TMEM192Q8IY95 271 aa17.97■□□□□ 0.47
CLCF1-201ENST00000312438 LRRN4CLQ8ND94 238 aa17.97■□□□□ 0.47
CLCF1-201ENST00000312438 PPP1R13LQ8WUF5 828 aa17.97■□□□□ 0.47
CLCF1-201ENST00000312438 UBXN4Q92575 508 aa17.97■□□□□ 0.47
CLCF1-201ENST00000312438 NUB1Q9Y5A7 615 aa17.97■□□□□ 0.47
CLCF1-201ENST00000312438 PCDHB2Q9Y5E7 798 aa17.97■□□□□ 0.47
CLCF1-201ENST00000312438 MYADML2A6NDP7 307 aa17.96■□□□□ 0.47
CLCF1-201ENST00000312438 LACTBL1A8MY62 500 aa17.96■□□□□ 0.47
CLCF1-201ENST00000312438 TMCO5BA8MYB1 307 aa17.96■□□□□ 0.47
CLCF1-201ENST00000312438 TADA3O75528 432 aa17.96■□□□□ 0.47
CLCF1-201ENST00000312438 EIF4BP23588 611 aaKnown RBP17.96■□□□□ 0.47
CLCF1-201ENST00000312438 TUBB4BP68371 445 aa17.96■□□□□ 0.47
CLCF1-201ENST00000312438 CATSPER4Q7RTX7 472 aa17.96■□□□□ 0.47
CLCF1-201ENST00000312438 DNAAF5Q86Y56 855 aa17.96■□□□□ 0.47
CLCF1-201ENST00000312438 EFCAB13Q8IY85 973 aa17.96■□□□□ 0.47
CLCF1-201ENST00000312438 CTNNBL1Q8WYA6 563 aaPredicted RBP17.96■□□□□ 0.47
CLCF1-201ENST00000312438 ACAP3Q96P50 834 aa17.96■□□□□ 0.47
CLCF1-201ENST00000312438 ARID3AQ99856 593 aa17.96■□□□□ 0.47
CLCF1-201ENST00000312438 CDHR5Q9HBB8 845 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms