RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 LYNP07948 512 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 ALAS1P13196 640 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 COMTP21964 271 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 PPP4R3CPQ6ZMV5 832 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 C7orf43Q8WVR3 580 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 CNKSR2Q8WXI2 1034 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 SLC35C1Q96A29 364 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 SPZ1Q9BXG8 430 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 ADAM33Q9BZ11 813 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 LAMB1P07942 1786 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 TRAFD1O14545 582 aaPredicted RBP19.19■□□□□ 0.66
SPSB4-201ENST00000310546 HOXA7P31268 230 aaPredicted RBP19.19■□□□□ 0.66
SPSB4-201ENST00000310546 CCNFP41002 786 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 AOC3Q16853 763 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 ARHGAP44Q17R89 818 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 NLRP9Q7RTR0 991 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 OLIG1Q8TAK6 271 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 MASTLQ96GX5 879 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 C9orf72Q96LT7 481 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 RHBDL2Q9NX52 303 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 KIAA1551Q9HCM1 1747 aa19.19■□□□□ 0.66
SPSB4-201ENST00000310546 DLEC1Q9Y238 1755 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 GSTTP1A0A1W2PQM5 241 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 POTEB3A0JP26 581 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 CFAP69A5D8W1 941 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 ANKRD62A6NC57 917 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 MIF4GDA9UHW6 222 aaKnown RBP19.18■□□□□ 0.66
SPSB4-201ENST00000310546 POTECB2RU33 542 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 PSMG1O95456 288 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 SPATA31D3P0C874 917 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 POTEBQ6S5H4 581 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 SPATA31D4Q6ZUB0 917 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 TUBGCP5Q96RT8 1024 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 WASF2Q9Y6W5 498 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 GYG2O15488 501 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 LRRN2O75325 713 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 ASMTLO95671 621 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 CLNKQ7Z7G1 428 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 CPNE8Q86YQ8 564 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 SLC13A5Q86YT5 568 aaPredicted RBP19.18■□□□□ 0.66
SPSB4-201ENST00000310546 RBM12BQ8IXT5 1001 aaKnown RBP19.18■□□□□ 0.66
SPSB4-201ENST00000310546 VPS52Q8N1B4 723 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 WDR60Q8WVS4 1066 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 C10orf82Q8WW14 230 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 AZIN2Q96A70 460 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 DNAJC12Q9UKB3 198 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 NUMBLQ9Y6R0 609 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 RTP1P59025 263 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 AP1B1Q10567 949 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 KNOP1Q1ED39 458 aaKnown RBP19.18■□□□□ 0.66
SPSB4-201ENST00000310546 ACBD5Q5T8D3 534 aaPredicted RBP19.18■□□□□ 0.66
SPSB4-201ENST00000310546 RNF207Q6ZRF8 634 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 C15orf52Q6ZUT6 534 aaKnown RBP19.18■□□□□ 0.66
SPSB4-201ENST00000310546 COA7Q96BR5 231 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 NINJ2Q9NZG7 142 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 PCDHA12Q9UN75 941 aa19.18■□□□□ 0.66
SPSB4-201ENST00000310546 RPL26L1Q9UNX3 145 aaKnown RBP19.18■□□□□ 0.66
SPSB4-201ENST00000310546 ATP8B3O60423 1300 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 EXOC3O60645 756 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 CCDC22O60826 627 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 FAM163BP0C2L3 166 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 ALDH1B1P30837 517 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 ITGA8P53708 1063 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 DEUP1Q05D60 604 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 WDR72Q3MJ13 1102 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 CYP4F22Q6NT55 531 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 ZNF365Q70YC5 407 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 LCA5Q86VQ0 697 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 ARHGAP18Q8N392 663 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 FLAD1Q8NFF5 587 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 MRRFQ96E11 262 aaKnown RBP19.17■□□□□ 0.66
SPSB4-201ENST00000310546 RTFDC1Q9BY42 306 aaPredicted RBP19.17■□□□□ 0.66
SPSB4-201ENST00000310546 KRT82Q9NSB4 513 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 GRID1Q9ULK0 1009 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 KLRG2A4D1S0 409 aaPredicted RBP19.17■□□□□ 0.66
SPSB4-201ENST00000310546 EDF1O60869 148 aaKnown RBP19.17■□□□□ 0.66
SPSB4-201ENST00000310546 PFDN1O60925 122 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 CYP11B2P19099 503 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 MAGEA8P43361 318 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 SPARCL1Q14515 664 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 ZNF444Q8N0Y2 327 aaPredicted RBP19.17■□□□□ 0.66
SPSB4-201ENST00000310546 C4orf33Q8N1A6 199 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 TLE6Q9H808 572 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 DNAJC18Q9H819 358 aa19.17■□□□□ 0.66
SPSB4-201ENST00000310546 SPOPO43791 374 aa19.16■□□□□ 0.66
SPSB4-201ENST00000310546 EDIL3O43854 480 aa19.16■□□□□ 0.66
SPSB4-201ENST00000310546 INHBCP55103 352 aa19.16■□□□□ 0.66
SPSB4-201ENST00000310546 USP46P62068 366 aa19.16■□□□□ 0.66
SPSB4-201ENST00000310546 CEP128Q6ZU80 1094 aa19.16■□□□□ 0.66
SPSB4-201ENST00000310546 ZC3H3Q8IXZ2 948 aaKnown RBP19.16■□□□□ 0.66
SPSB4-201ENST00000310546 SYNCQ9H7C4 482 aa19.16■□□□□ 0.66
SPSB4-201ENST00000310546 ANKRD31Q8N7Z5 1873 aa19.16■□□□□ 0.66
SPSB4-201ENST00000310546 PDLIM1O00151 329 aa19.16■□□□□ 0.66
SPSB4-201ENST00000310546 ATMINO43313 823 aaPredicted RBP19.16■□□□□ 0.66
SPSB4-201ENST00000310546 HNRNPRO43390 633 aaKnown RBP19.16■□□□□ 0.66
SPSB4-201ENST00000310546 FTLP02792 175 aaPredicted RBP19.16■□□□□ 0.66
SPSB4-201ENST00000310546 IL1R1P14778 569 aa19.16■□□□□ 0.66
SPSB4-201ENST00000310546 PPP2R5CQ13362 524 aa19.16■□□□□ 0.66
SPSB4-201ENST00000310546 THOC5Q13769 683 aaKnown RBP19.16■□□□□ 0.66
SPSB4-201ENST00000310546 SBK1Q52WX2 424 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms