RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 CCDC181Q5TID7 509 aa22.86■■□□□ 1.25
ATG4D-201ENST00000309469 SYCE1Q8N0S2 351 aa22.86■■□□□ 1.25
ATG4D-201ENST00000309469 USP6NLQ92738 828 aa22.86■■□□□ 1.25
ATG4D-201ENST00000309469 ARHGEF26Q96DR7 871 aa22.86■■□□□ 1.25
ATG4D-201ENST00000309469 APOBEC3GQ9HC16 384 aaKnown RBP22.86■■□□□ 1.25
ATG4D-201ENST00000309469 OSGEPQ9NPF4 335 aa22.86■■□□□ 1.25
ATG4D-201ENST00000309469 ZNF446Q9NWS9 450 aa22.86■■□□□ 1.25
ATG4D-201ENST00000309469 RNF14Q9UBS8 474 aa22.86■■□□□ 1.25
ATG4D-201ENST00000309469 TRPM7Q96QT4 1865 aa22.85■■□□□ 1.25
ATG4D-201ENST00000309469 VTNP04004 478 aa22.85■■□□□ 1.25
ATG4D-201ENST00000309469 PAFAH1B1P43034 410 aa22.85■■□□□ 1.25
ATG4D-201ENST00000309469 NCOA4Q13772 614 aa22.85■■□□□ 1.25
ATG4D-201ENST00000309469 MARCH8Q5T0T0 291 aa22.85■■□□□ 1.25
ATG4D-201ENST00000309469 TMCO3Q6UWJ1 677 aa22.85■■□□□ 1.25
ATG4D-201ENST00000309469 THNSL1Q8IYQ7 743 aa22.85■■□□□ 1.25
ATG4D-201ENST00000309469 DDX1Q92499 740 aaKnown RBP22.85■■□□□ 1.25
ATG4D-201ENST00000309469 FAM212AQ96EL1 285 aa22.85■■□□□ 1.25
ATG4D-201ENST00000309469 PNKPQ96T60 521 aa22.85■■□□□ 1.25
ATG4D-201ENST00000309469 GOLPH3Q9H4A6 298 aa22.85■■□□□ 1.25
ATG4D-201ENST00000309469 RAB21Q9UL25 225 aa22.85■■□□□ 1.25
ATG4D-201ENST00000309469 GNEQ9Y223 722 aaKnown RBP22.85■■□□□ 1.25
ATG4D-201ENST00000309469 A6NJR5 290 aa22.84■■□□□ 1.25
ATG4D-201ENST00000309469 DNA2P51530 1060 aa22.84■■□□□ 1.25
ATG4D-201ENST00000309469 CUL2Q13617 745 aa22.84■■□□□ 1.25
ATG4D-201ENST00000309469 CDR2LQ86X02 465 aaPredicted RBP22.84■■□□□ 1.25
ATG4D-201ENST00000309469 TAF4BQ92750 862 aa22.84■■□□□ 1.25
ATG4D-201ENST00000309469 CDT1Q9H211 546 aa22.84■■□□□ 1.25
ATG4D-201ENST00000309469 FAM170AA1A519 330 aa22.84■■□□□ 1.25
ATG4D-201ENST00000309469 KIF4AO95239 1232 aa22.84■■□□□ 1.25
ATG4D-201ENST00000309469 ZNF865P0CJ78 1059 aaPredicted RBP22.84■■□□□ 1.25
ATG4D-201ENST00000309469 GPC5P78333 572 aa22.84■■□□□ 1.25
ATG4D-201ENST00000309469 BRD3Q15059 726 aa22.84■■□□□ 1.25
ATG4D-201ENST00000309469 AMHR2Q16671 573 aa22.84■■□□□ 1.25
ATG4D-201ENST00000309469 DUOXA2Q1HG44 320 aa22.84■■□□□ 1.25
ATG4D-201ENST00000309469 CFAP221Q4G0U5 840 aa22.84■■□□□ 1.25
ATG4D-201ENST00000309469 DAAM2Q86T65 1068 aa22.84■■□□□ 1.25
ATG4D-201ENST00000309469 SPATA4Q8NEY3 305 aa22.84■■□□□ 1.25
ATG4D-201ENST00000309469 PPP1R16BQ96T49 567 aa22.84■■□□□ 1.25
ATG4D-201ENST00000309469 STXBP5LQ9Y2K9 1186 aa22.84■■□□□ 1.25
ATG4D-201ENST00000309469 ZEB2O60315 1214 aa22.83■■□□□ 1.25
ATG4D-201ENST00000309469 CSDE1O75534 798 aaKnown RBP22.83■■□□□ 1.25
ATG4D-201ENST00000309469 TUBBP07437 444 aa22.83■■□□□ 1.25
ATG4D-201ENST00000309469 CLTAP09496 248 aa22.83■■□□□ 1.25
ATG4D-201ENST00000309469 ACO1P21399 889 aaKnown RBP22.83■■□□□ 1.25
ATG4D-201ENST00000309469 C2orf54Q08AI8 447 aa22.83■■□□□ 1.25
ATG4D-201ENST00000309469 TCEAL1Q15170 157 aa22.83■■□□□ 1.25
ATG4D-201ENST00000309469 PEX26Q7Z412 305 aa22.83■■□□□ 1.25
ATG4D-201ENST00000309469 RHOT2Q8IXI1 618 aa22.83■■□□□ 1.25
ATG4D-201ENST00000309469 MS4A14Q96JA4 679 aa22.83■■□□□ 1.25
ATG4D-201ENST00000309469 ZFYVE28Q9HCC9 887 aa22.83■■□□□ 1.25
ATG4D-201ENST00000309469 EHD2Q9NZN4 543 aa22.83■■□□□ 1.25
ATG4D-201ENST00000309469 NUB1Q9Y5A7 615 aa22.83■■□□□ 1.25
ATG4D-201ENST00000309469 SPDYE4A6NLX3 237 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 BUB1BO60566 1050 aaPredicted RBP22.82■■□□□ 1.24
ATG4D-201ENST00000309469 CST3P01034 146 aaPredicted RBP22.82■■□□□ 1.24
ATG4D-201ENST00000309469 TBXAS1P24557 533 aaPredicted RBP22.82■■□□□ 1.24
ATG4D-201ENST00000309469 CYP2C19P33261 490 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 BPIFB4P59827 614 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 NOP14P78316 857 aaKnown RBP22.82■■□□□ 1.24
ATG4D-201ENST00000309469 CCL14Q16627 93 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 MMGT1Q8N4V1 131 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 CEP120Q8N960 986 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 MTMR12Q9C0I1 747 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 SMARCAL1Q9NZC9 954 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 OGFRQ9NZT2 677 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 PCDHB2Q9Y5E7 798 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 CCDC151A5D8V7 595 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 RRN3P2A6NIE6 340 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 CES2O00748 559 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 CYP2B6P20813 491 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 RGS2P41220 211 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 HADHBP55084 474 aaKnown RBP22.82■■□□□ 1.24
ATG4D-201ENST00000309469 OSTNP61366 133 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 OLFML2BQ68BL8 750 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 SCARA3Q6AZY7 606 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 CC2D1AQ6P1N0 951 aaPredicted RBP22.82■■□□□ 1.24
ATG4D-201ENST00000309469 NT5DC3Q86UY8 548 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 KIAA0319LQ8IZA0 1049 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 NLRP7Q8WX94 980 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 CALR3Q96L12 384 aaKnown RBP22.82■■□□□ 1.24
ATG4D-201ENST00000309469 IMPG2Q9BZV3 1241 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 ABCB6Q9NP58 842 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 SETD4Q9NVD3 440 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 COG5Q9UP83 839 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 PASKQ96RG2 1323 aa22.82■■□□□ 1.24
ATG4D-201ENST00000309469 GPR25O00155 361 aa22.81■■□□□ 1.24
ATG4D-201ENST00000309469 B4GALT4O60513 344 aa22.81■■□□□ 1.24
ATG4D-201ENST00000309469 ASS1P00966 412 aaKnown RBP22.81■■□□□ 1.24
ATG4D-201ENST00000309469 RPF1Q9H9Y2 349 aaKnown RBP22.81■■□□□ 1.24
ATG4D-201ENST00000309469 GJD2Q9UKL4 321 aa22.81■■□□□ 1.24
ATG4D-201ENST00000309469 FAM155AB1AL88 458 aaPredicted RBP22.8■■□□□ 1.24
ATG4D-201ENST00000309469 KCNK3O14649 394 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 ZRANB2O95218 330 aaKnown RBP eCLIP22.8■■□□□ 1.24
ATG4D-201ENST00000309469 MCF2P10911 925 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 TFAMQ00059 246 aaKnown RBP22.8■■□□□ 1.24
ATG4D-201ENST00000309469 ZNF677Q86XU0 584 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 PBKQ96KB5 322 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 PDZD7Q9H5P4 517 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 ARFGAP3Q9NP61 516 aa22.8■■□□□ 1.24
ATG4D-201ENST00000309469 CTTNBP2NLQ9P2B4 639 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms