RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 FOXQ1Q9C009 403 aa13.41□□□□□ -0.26
TPT1-201ENST00000309246 BHMT2Q9H2M3 363 aa13.41□□□□□ -0.26
TPT1-201ENST00000309246 GOLGA2P5Q9HBQ8 144 aa13.41□□□□□ -0.26
TPT1-201ENST00000309246 HCFC1R1Q9NWW0 138 aa13.41□□□□□ -0.26
TPT1-201ENST00000309246 R4GN57 208 aa13.41□□□□□ -0.26
TPT1-201ENST00000309246 TMEM189-UBE2V1I3L0A0 370 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 I3L4J1 428 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 XYLBO75191 536 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 B3GAT3O94766 335 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 FGFR3P22607 806 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 TKTP29401 623 aaKnown RBP13.4□□□□□ -0.26
TPT1-201ENST00000309246 HOXA9P31269 272 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 BRCC3P46736 316 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 CLCNKBP51801 687 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 GPC5P78333 572 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 ORC2Q13416 577 aaPredicted RBP13.4□□□□□ -0.26
TPT1-201ENST00000309246 RAB33AQ14088 237 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 AXDND1Q5T1B0 1012 aaPredicted RBP13.4□□□□□ -0.26
TPT1-201ENST00000309246 PDXDC1Q6P996 788 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 CEP120Q8N960 986 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 FGF13Q92913 245 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 DDX27Q96GQ7 796 aaKnown RBP13.4□□□□□ -0.26
TPT1-201ENST00000309246 FOXP1Q9H334 677 aaPredicted RBP13.4□□□□□ -0.26
TPT1-201ENST00000309246 OCEL1Q9H607 264 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 DLGAP2Q9P1A6 1054 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 MTRRQ9UBK8 725 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 KIAA1024Q9UPX6 916 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 SIT1Q9Y3P8 196 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 CDY1Q9Y6F8 540 aa13.4□□□□□ -0.26
TPT1-201ENST00000309246 ZFP37Q9Y6Q3 630 aaPredicted RBP13.4□□□□□ -0.26
TPT1-201ENST00000309246 LRRN2O75325 713 aa13.39□□□□□ -0.27
TPT1-201ENST00000309246 MUTP22033 750 aa13.39□□□□□ -0.27
TPT1-201ENST00000309246 RBM25P49756 843 aaKnown RBP13.39□□□□□ -0.27
TPT1-201ENST00000309246 EFNA5P52803 228 aa13.39□□□□□ -0.27
TPT1-201ENST00000309246 SOX4Q06945 474 aaPredicted RBP13.39□□□□□ -0.27
TPT1-201ENST00000309246 GNL2Q13823 731 aaKnown RBP13.39□□□□□ -0.27
TPT1-201ENST00000309246 CD300LGQ6UXG3 332 aa13.39□□□□□ -0.27
TPT1-201ENST00000309246 RSPO2Q6UXX9 243 aaPredicted RBP13.39□□□□□ -0.27
TPT1-201ENST00000309246 MTSS1LQ765P7 747 aa13.39□□□□□ -0.27
TPT1-201ENST00000309246 C3orf58Q8NDZ4 430 aa13.39□□□□□ -0.27
TPT1-201ENST00000309246 PJA1Q8NG27 643 aa13.39□□□□□ -0.27
TPT1-201ENST00000309246 KCNG4Q8TDN1 519 aa13.39□□□□□ -0.27
TPT1-201ENST00000309246 ING5Q8WYH8 240 aa13.39□□□□□ -0.27
TPT1-201ENST00000309246 KIFAP3Q92845 792 aa13.39□□□□□ -0.27
TPT1-201ENST00000309246 KXD1Q9BQD3 176 aa13.39□□□□□ -0.27
TPT1-201ENST00000309246 DDX19AQ9NUU7 478 aaKnown RBP13.39□□□□□ -0.27
TPT1-201ENST00000309246 DNMT3BQ9UBC3 853 aaKnown RBP13.39□□□□□ -0.27
TPT1-201ENST00000309246 LRWD1Q9UFC0 647 aa13.39□□□□□ -0.27
TPT1-201ENST00000309246 LIMCH1Q9UPQ0 1083 aa13.39□□□□□ -0.27
TPT1-201ENST00000309246 TNFSF13BQ9Y275 285 aa13.39□□□□□ -0.27
TPT1-201ENST00000309246 PHLPP2Q6ZVD8 1323 aa13.39□□□□□ -0.27
TPT1-201ENST00000309246 K7ERI5 159 aa13.38□□□□□ -0.27
TPT1-201ENST00000309246 GLULP15104 373 aa13.38□□□□□ -0.27
TPT1-201ENST00000309246 STARD6P59095 220 aa13.38□□□□□ -0.27
TPT1-201ENST00000309246 OSTNP61366 133 aa13.38□□□□□ -0.27
TPT1-201ENST00000309246 SNW1Q13573 536 aaKnown RBP13.38□□□□□ -0.27
TPT1-201ENST00000309246 UPP1Q16831 310 aa13.38□□□□□ -0.27
TPT1-201ENST00000309246 ZNF568Q3ZCX4 644 aa13.38□□□□□ -0.27
TPT1-201ENST00000309246 PABPC1LQ4VXU2 614 aaKnown RBP13.38□□□□□ -0.27
TPT1-201ENST00000309246 APBB1IPQ7Z5R6 666 aaPredicted RBP13.38□□□□□ -0.27
TPT1-201ENST00000309246 NPAS3Q8IXF0 933 aa13.38□□□□□ -0.27
TPT1-201ENST00000309246 C4orf32Q8N8J7 132 aa13.38□□□□□ -0.27
TPT1-201ENST00000309246 FBXO18Q8NFZ0 1043 aa13.38□□□□□ -0.27
TPT1-201ENST00000309246 SNX29Q8TEQ0 813 aa13.38□□□□□ -0.27
TPT1-201ENST00000309246 UROC1Q96N76 676 aa13.38□□□□□ -0.27
TPT1-201ENST00000309246 LLPHQ9BRT6 129 aaKnown RBP13.38□□□□□ -0.27
TPT1-201ENST00000309246 CDT1Q9H211 546 aa13.38□□□□□ -0.27
TPT1-201ENST00000309246 PPP4R2Q9NY27 417 aa13.38□□□□□ -0.27
TPT1-201ENST00000309246 NOL7Q9UMY1 257 aaKnown RBP13.38□□□□□ -0.27
TPT1-201ENST00000309246 ANK1P16157 1881 aa13.38□□□□□ -0.27
TPT1-201ENST00000309246 SPTBN4Q9H254 2564 aa13.37□□□□□ -0.27
TPT1-201ENST00000309246 TICRRQ7Z2Z1 1910 aa13.37□□□□□ -0.27
TPT1-201ENST00000309246 SMIM28A0A1B0GU29 152 aa13.37□□□□□ -0.27
TPT1-201ENST00000309246 CCDC169A6NNP5 214 aa13.37□□□□□ -0.27
TPT1-201ENST00000309246 E9PMD0 336 aa13.37□□□□□ -0.27
TPT1-201ENST00000309246 LMNAP02545 664 aaKnown RBP13.37□□□□□ -0.27
TPT1-201ENST00000309246 POU2F2P09086 479 aa13.37□□□□□ -0.27
TPT1-201ENST00000309246 SP9P0CG40 484 aa13.37□□□□□ -0.27
TPT1-201ENST00000309246 GRM5P41594 1212 aa13.37□□□□□ -0.27
TPT1-201ENST00000309246 ID4P47928 161 aa13.37□□□□□ -0.27
TPT1-201ENST00000309246 NPTX2P47972 431 aa13.37□□□□□ -0.27
TPT1-201ENST00000309246 YARSP54577 528 aaKnown RBP13.37□□□□□ -0.27
TPT1-201ENST00000309246 PEX3P56589 373 aa13.37□□□□□ -0.27
TPT1-201ENST00000309246 MLF2Q15773 248 aaPredicted RBP13.37□□□□□ -0.27
TPT1-201ENST00000309246 UVSSAQ2YD98 709 aa13.37□□□□□ -0.27
TPT1-201ENST00000309246 ANKS3Q6ZW76 656 aa13.37□□□□□ -0.27
TPT1-201ENST00000309246 TAS1R3Q7RTX0 852 aa13.37□□□□□ -0.27
TPT1-201ENST00000309246 C1orf210Q8IVY1 113 aa13.37□□□□□ -0.27
TPT1-201ENST00000309246 SHDQ96IW2 340 aa13.37□□□□□ -0.27
TPT1-201ENST00000309246 ACO2Q99798 780 aaKnown RBP13.37□□□□□ -0.27
TPT1-201ENST00000309246 CCDC94Q9BW85 323 aaPredicted RBP13.37□□□□□ -0.27
TPT1-201ENST00000309246 BACE2Q9Y5Z0 518 aa13.37□□□□□ -0.27
TPT1-201ENST00000309246 KANSL1LA0AUZ9 987 aa13.36□□□□□ -0.27
TPT1-201ENST00000309246 PP2D1A8MPX8 630 aa13.36□□□□□ -0.27
TPT1-201ENST00000309246 TRAPPC3O43617 180 aa13.36□□□□□ -0.27
TPT1-201ENST00000309246 HIP1RO75146 1068 aa13.36□□□□□ -0.27
TPT1-201ENST00000309246 TRAPPC10P48553 1259 aa13.36□□□□□ -0.27
TPT1-201ENST00000309246 HMGN5P82970 282 aaKnown RBP13.36□□□□□ -0.27
TPT1-201ENST00000309246 ROR1Q01973 937 aa13.36□□□□□ -0.27
TPT1-201ENST00000309246 PTGDRQ13258 359 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms