RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 IFNB1P01574 187 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 GZMAP12544 262 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 HADHBP55084 474 aaKnown RBP11.86□□□□□ -0.51
PTPN7-201ENST00000309017 FAM182BQ5T319 152 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 PADI6Q6TGC4 694 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 PTF1AQ7RTS3 328 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 APBB1IPQ7Z5R6 666 aaPredicted RBP11.86□□□□□ -0.51
PTPN7-201ENST00000309017 STK32AQ8WU08 396 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 TEKT1Q969V4 418 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 MCUR1Q96AQ8 359 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 NT5C1BQ96P26 610 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 NPHS2Q9NP85 383 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 ENTPD5O75356 428 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 RALAP11233 206 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 CETPP11597 493 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 BMP3P12645 472 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 PLS3P13797 630 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 ATF7P17544 494 aaPredicted RBP11.86□□□□□ -0.51
PTPN7-201ENST00000309017 MAGEA4P43358 317 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 ZRSR2Q15696 482 aaKnown RBP11.86□□□□□ -0.51
PTPN7-201ENST00000309017 P3H1Q32P28 736 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 TMEM154Q6P9G4 183 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 BBOF1Q8ND07 529 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 DNAJC9Q8WXX5 260 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 ACCSQ96QU6 501 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 TBC1D10AQ9BXI6 508 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 HSPBP1Q9NZL4 362 aa11.86□□□□□ -0.51
PTPN7-201ENST00000309017 PLIN4Q96Q06 1357 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 UTRNP46939 3433 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 CNTNAP4Q9C0A0 1308 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 CYP11B1P15538 503 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 CHRNB2P17787 502 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 ATP4AP20648 1035 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 RRM1P23921 792 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 GRIK3Q13003 919 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 CDC42EP5Q6NZY7 148 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 SLC30A9Q6PML9 568 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 ASRGL1Q7L266 308 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 OTOP1Q7RTM1 612 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 VPS52Q8N1B4 723 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 TAB3Q8N5C8 712 aaPredicted RBP11.85□□□□□ -0.51
PTPN7-201ENST00000309017 FAM13CQ8NE31 585 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 TTC8Q8TAM2 541 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 DHX38Q92620 1227 aaKnown RBP11.85□□□□□ -0.51
PTPN7-201ENST00000309017 CRAMP1Q96RY5 1269 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 HSD17B14Q9BPX1 270 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 TMEM117Q9H0C3 514 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 TMEM206Q9H813 350 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 UBN1Q9NPG3 1134 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 LRRC4BQ9NT99 713 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 KLHL11Q9NVR0 708 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 CYP39A1Q9NYL5 469 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 TROVE2P10155 538 aaKnown RBP eCLIP11.85□□□□□ -0.51
PTPN7-201ENST00000309017 SKIV2L2P42285 1042 aaKnown RBP11.85□□□□□ -0.51
PTPN7-201ENST00000309017 CDR2Q01850 454 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 KLC1Q07866 573 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 TNFAIP8L3Q5GJ75 292 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 TEX9Q8N6V9 391 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 STMN2Q93045 179 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 VCXQ9H320 206 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 DLGAP2Q9P1A6 1054 aa11.85□□□□□ -0.51
PTPN7-201ENST00000309017 R3HDM2Q9Y2K5 976 aaKnown RBP11.85□□□□□ -0.51
PTPN7-201ENST00000309017 A0A0G2JND7 137 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 NDUFB10O96000 172 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 CD58P19256 250 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 ABL2P42684 1182 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 FMO1Q01740 532 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 TAF1BQ53T94 588 aaPredicted RBP11.84□□□□□ -0.51
PTPN7-201ENST00000309017 CGB2Q6NT52 195 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 ZFPM1Q8IX07 1006 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 SCYL3Q8IZE3 742 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 CPA5Q8WXQ8 436 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 TEKT3Q9BXF9 490 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 DCLK3Q9C098 648 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 PRKAG3Q9UGI9 489 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 CHKBQ9Y259 395 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 DPPA5A6NC42 116 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 FSCN2O14926 492 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 ATP2A1O14983 1001 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 CCNB1P14635 433 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 SSTR3P32745 418 aaPredicted RBP11.84□□□□□ -0.51
PTPN7-201ENST00000309017 WDR4P57081 412 aaKnown RBP11.84□□□□□ -0.51
PTPN7-201ENST00000309017 PTK6Q13882 451 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 SIX1Q15475 284 aaPredicted RBP11.84□□□□□ -0.51
PTPN7-201ENST00000309017 MIER3Q7Z3K6 550 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 TMX4Q9H1E5 349 aaPredicted RBP11.84□□□□□ -0.51
PTPN7-201ENST00000309017 ALG13Q9NP73 1137 aaKnown RBP11.84□□□□□ -0.51
PTPN7-201ENST00000309017 DMAC2Q9NW81 257 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 UBE4BO95155 1302 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 GOLGA8SH3BPF8 625 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 GOLGA8MH3BSY2 632 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 POLR2MP0CAP2 368 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 NSFP46459 744 aaKnown RBP11.84□□□□□ -0.51
PTPN7-201ENST00000309017 POLE2P56282 527 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 MRPS35P82673 323 aaKnown RBP11.84□□□□□ -0.51
PTPN7-201ENST00000309017 SYDE1Q6ZW31 735 aaPredicted RBP11.84□□□□□ -0.51
PTPN7-201ENST00000309017 ZC3H18Q86VM9 953 aaKnown RBP11.84□□□□□ -0.51
PTPN7-201ENST00000309017 ZSWIM2Q8NEG5 633 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 FBXO41Q8TF61 875 aa11.84□□□□□ -0.51
PTPN7-201ENST00000309017 HAUS1Q96CS2 278 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms