RNA–Protein interactions for RNA: ENST00000308769.12

RFWD2-201, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 1 (best) BASIC

Gene RFWD2, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-201ENST00000308769 UMODL1Q5DID0 1318 aa25.84■■□□□ 1.73
RFWD2-201ENST00000308769 ABLIM1O14639 778 aa25.84■■□□□ 1.73
RFWD2-201ENST00000308769 CLSTN1O94985 981 aa25.84■■□□□ 1.73
RFWD2-201ENST00000308769 TNFRSF8P28908 595 aa25.84■■□□□ 1.73
RFWD2-201ENST00000308769 GPS2Q13227 327 aa25.84■■□□□ 1.73
RFWD2-201ENST00000308769 ALG3Q92685 438 aa25.84■■□□□ 1.73
RFWD2-201ENST00000308769 CALR3Q96L12 384 aaKnown RBP25.84■■□□□ 1.73
RFWD2-201ENST00000308769 VIPAS39Q9H9C1 493 aa25.84■■□□□ 1.73
RFWD2-201ENST00000308769 GDF3Q9NR23 364 aa25.84■■□□□ 1.73
RFWD2-201ENST00000308769 ITGA4P13612 1032 aa25.83■■□□□ 1.73
RFWD2-201ENST00000308769 IGBP1P78318 339 aa25.83■■□□□ 1.73
RFWD2-201ENST00000308769 CUL2Q13617 745 aa25.83■■□□□ 1.73
RFWD2-201ENST00000308769 MAMDC4Q6UXC1 1216 aa25.83■■□□□ 1.73
RFWD2-201ENST00000308769 NUP85Q9BW27 656 aa25.83■■□□□ 1.73
RFWD2-201ENST00000308769 C2orf40Q9H1Z8 148 aa25.83■■□□□ 1.73
RFWD2-201ENST00000308769 ERAP1Q9NZ08 941 aa25.83■■□□□ 1.73
RFWD2-201ENST00000308769 ZSWIM8A7E2V4 1837 aa25.83■■□□□ 1.72
RFWD2-201ENST00000308769 KRIT1O00522 736 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 NOP14P78316 857 aaKnown RBP25.82■■□□□ 1.72
RFWD2-201ENST00000308769 MESDQ14696 234 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 CLEC16AQ2KHT3 1053 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 ACAD10Q6JQN1 1059 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 SND1Q7KZF4 910 aaKnown RBP eCLIP25.82■■□□□ 1.72
RFWD2-201ENST00000308769 ZNF564Q8TBZ8 553 aaPredicted RBP25.82■■□□□ 1.72
RFWD2-201ENST00000308769 CCDC102AQ96A19 550 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 BTBD6Q96KE9 485 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 JPH2Q9BR39 696 aaPredicted RBP25.82■■□□□ 1.72
RFWD2-201ENST00000308769 GTF3C4Q9UKN8 822 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 SLC45A1Q9Y2W3 748 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 NUB1Q9Y5A7 615 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 B4GALT5O43286 388 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 PHACTR2O75167 634 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 MTA2O94776 668 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 FGGP02679 453 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 LGALS2P05162 132 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 CYP1A2P05177 515 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 ACO1P21399 889 aaKnown RBP25.82■■□□□ 1.72
RFWD2-201ENST00000308769 CARSP49589 748 aaKnown RBP25.82■■□□□ 1.72
RFWD2-201ENST00000308769 EPHB4P54760 987 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 NCOA4Q13772 614 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 IFT20Q8IY31 132 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 FAM212AQ96EL1 285 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 DDX47Q9H0S4 455 aaKnown RBP25.82■■□□□ 1.72
RFWD2-201ENST00000308769 PCDHB2Q9Y5E7 798 aa25.82■■□□□ 1.72
RFWD2-201ENST00000308769 UNCXA6NJT0 531 aa25.81■■□□□ 1.72
RFWD2-201ENST00000308769 INO80B-WBP1J3KQ70 363 aa25.81■■□□□ 1.72
RFWD2-201ENST00000308769 OGTO15294 1046 aa25.81■■□□□ 1.72
RFWD2-201ENST00000308769 C22orf31O95567 290 aa25.81■■□□□ 1.72
RFWD2-201ENST00000308769 CLTAP09496 248 aa25.81■■□□□ 1.72
RFWD2-201ENST00000308769 MCL1Q07820 350 aa25.81■■□□□ 1.72
RFWD2-201ENST00000308769 ZNF211Q13398 564 aaPredicted RBP25.81■■□□□ 1.72
RFWD2-201ENST00000308769 CDR2LQ86X02 465 aaPredicted RBP25.81■■□□□ 1.72
RFWD2-201ENST00000308769 KRT35Q92764 455 aa25.81■■□□□ 1.72
RFWD2-201ENST00000308769 RNPC3Q96LT9 517 aaKnown RBP25.81■■□□□ 1.72
RFWD2-201ENST00000308769 INO80BQ9C086 356 aaPredicted RBP25.81■■□□□ 1.72
RFWD2-201ENST00000308769 MTMR12Q9C0I1 747 aa25.81■■□□□ 1.72
RFWD2-201ENST00000308769 CARD9Q9H257 536 aa25.81■■□□□ 1.72
RFWD2-201ENST00000308769 IVNS1ABPQ9Y6Y0 642 aa25.81■■□□□ 1.72
RFWD2-201ENST00000308769 ADCYAP1R1P41586 468 aa25.81■■□□□ 1.72
RFWD2-201ENST00000308769 MARCKSL1P49006 195 aa25.81■■□□□ 1.72
RFWD2-201ENST00000308769 LAMC2Q13753 1193 aa25.81■■□□□ 1.72
RFWD2-201ENST00000308769 TRADDQ15628 312 aa25.81■■□□□ 1.72
RFWD2-201ENST00000308769 ACBD3Q9H3P7 528 aa25.81■■□□□ 1.72
RFWD2-201ENST00000308769 MINDY3Q9H8M7 445 aa25.81■■□□□ 1.72
RFWD2-201ENST00000308769 VTA1Q9NP79 307 aa25.81■■□□□ 1.72
RFWD2-201ENST00000308769 SART1O43290 800 aaKnown RBP25.8■■□□□ 1.72
RFWD2-201ENST00000308769 UNGP13051 313 aaPredicted RBP25.8■■□□□ 1.72
RFWD2-201ENST00000308769 INSRRP14616 1297 aa25.8■■□□□ 1.72
RFWD2-201ENST00000308769 COMTP21964 271 aa25.8■■□□□ 1.72
RFWD2-201ENST00000308769 TFDP1Q14186 410 aa25.8■■□□□ 1.72
RFWD2-201ENST00000308769 KCTD19Q17RG1 926 aaPredicted RBP25.8■■□□□ 1.72
RFWD2-201ENST00000308769 TMEM270Q6UE05 265 aa25.8■■□□□ 1.72
RFWD2-201ENST00000308769 CPNE8Q86YQ8 564 aa25.8■■□□□ 1.72
RFWD2-201ENST00000308769 WDR49Q8IV35 697 aa25.8■■□□□ 1.72
RFWD2-201ENST00000308769 CASKIN2Q8WXE0 1202 aa25.8■■□□□ 1.72
RFWD2-201ENST00000308769 IFT81Q8WYA0 676 aa25.8■■□□□ 1.72
RFWD2-201ENST00000308769 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.8■■□□□ 1.72
RFWD2-201ENST00000308769 CPSF3Q9UKF6 684 aaKnown RBP25.8■■□□□ 1.72
RFWD2-201ENST00000308769 TTC7AQ9ULT0 858 aaPredicted RBP25.8■■□□□ 1.72
RFWD2-201ENST00000308769 NFU1Q9UMS0 254 aa25.8■■□□□ 1.72
RFWD2-201ENST00000308769 CST3P01034 146 aaPredicted RBP25.79■■□□□ 1.72
RFWD2-201ENST00000308769 GH1P01241 217 aa25.79■■□□□ 1.72
RFWD2-201ENST00000308769 ZNF286BP0CG31 522 aa25.79■■□□□ 1.72
RFWD2-201ENST00000308769 GYS2P54840 703 aa25.79■■□□□ 1.72
RFWD2-201ENST00000308769 NAA35Q5VZE5 725 aa25.79■■□□□ 1.72
RFWD2-201ENST00000308769 ANKRD23Q86SG2 305 aa25.79■■□□□ 1.72
RFWD2-201ENST00000308769 AFG1LQ8WV93 481 aa25.79■■□□□ 1.72
RFWD2-201ENST00000308769 KATNBL1Q9H079 304 aa25.79■■□□□ 1.72
RFWD2-201ENST00000308769 GBA2Q9HCG7 927 aaPredicted RBP25.79■■□□□ 1.72
RFWD2-201ENST00000308769 MORF4L1Q9UBU8 362 aa25.79■■□□□ 1.72
RFWD2-201ENST00000308769 PCDHB4Q9Y5E5 795 aa25.79■■□□□ 1.72
RFWD2-201ENST00000308769 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.79■■□□□ 1.72
RFWD2-201ENST00000308769 CCDC188H7C350 402 aa25.79■■□□□ 1.72
RFWD2-201ENST00000308769 ACKR2O00590 384 aa25.79■■□□□ 1.72
RFWD2-201ENST00000308769 IQCF3P0C7M6 154 aa25.79■■□□□ 1.72
RFWD2-201ENST00000308769 PROZP22891 400 aa25.79■■□□□ 1.72
RFWD2-201ENST00000308769 ATF7IP2Q5U623 682 aa25.79■■□□□ 1.72
RFWD2-201ENST00000308769 AADACL2Q6P093 401 aa25.79■■□□□ 1.72
RFWD2-201ENST00000308769 MPZL3Q6UWV2 235 aa25.79■■□□□ 1.72
RFWD2-201ENST00000308769 TSHZ1Q6ZSZ6 1077 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms