RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 CARSP49589 748 aaKnown RBP12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 CDH6P55285 790 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 GLIS3Q8NEA6 775 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 PRPF31Q8WWY3 499 aaKnown RBP12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 ADAMTSL3P82987 1691 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 RGPD1P0DJD0 1748 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 SETD1AO15047 1707 aaKnown RBP12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 MMEP08473 750 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 OAZ1P54368 228 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 SEZ6Q53EL9 994 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 IZUMO3Q5VZ72 239 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 RSRC1Q96IZ7 334 aaKnown RBP12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 SCYL1Q96KG9 808 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 TTC25Q96NG3 672 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 KLHL11Q9NVR0 708 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 DDNO94850 711 aaPredicted RBP12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 SNHG28P0DPA3 235 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 MAPTP10636 758 aaKnown RBP12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 MUM1L1Q5H9M0 696 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 MFSD14CQ5VZR4 134 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 DNERQ8NFT8 737 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 TMC2Q8TDI7 906 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 DNAJC19Q96DA6 116 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 PNKPQ96T60 521 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 MMTAG2Q9BU76 263 aaKnown RBP12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 GLIS2Q9BZE0 524 aaPredicted RBP12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 SPATC1LQ9H0A9 340 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 AIPL1Q9NZN9 384 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 RASA4BC9J798 803 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 OGTO15294 1046 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 RASA4O43374 803 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 GRIN3BO60391 1043 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 PPP2R2AP63151 447 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 C9orf131Q5VYM1 1079 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 NUGGCQ68CJ6 796 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 KIAA1841Q6NSI8 718 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 BTNL9Q6UXG8 535 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 RCOR2Q8IZ40 523 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 TAS1R2Q8TE23 839 aa12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 MAGED2Q9UNF1 606 aaPredicted RBP12.11□□□□□ -0.47
PCDHGC3-201ENST00000308177 IQANK1A0A1B0GTG1 560 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 SGPL1O95470 568 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 GTF2H1P32780 548 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 CDR2Q01850 454 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 TMEM62Q0P6H9 643 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 CUL2Q13617 745 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 TRIM42Q8IWZ5 723 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 SRRM1Q8IYB3 904 aaKnown RBP12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 POP1Q99575 1024 aaKnown RBP12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 PSMD10O75832 226 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 H2AFXP16104 143 aaPredicted RBP12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 SOX10P56693 466 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 STILQ15468 1287 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 THEM5Q8N1Q8 247 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 BBS5Q8N3I7 341 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 TNIP3Q96KP6 325 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 MCEEQ96PE7 176 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 MROH8Q9H579 483 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 TBC1D12O60347 775 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 CLTAP09496 248 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 MEA1Q16626 185 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 ACAD10Q6JQN1 1059 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 GPAT2Q6NUI2 795 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 NID2Q14112 1375 aa12.1□□□□□ -0.47
PCDHGC3-201ENST00000308177 TOM1L1O75674 476 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 CYP2B6P20813 491 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 ARSEP51690 589 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 SV2AQ7L0J3 742 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 JAMLQ86YT9 394 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 NKX2-3Q8TAU0 364 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 RIN2Q8WYP3 895 aaPredicted RBP12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 RAB3IPQ96QF0 476 aaPredicted RBP12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 OSBPL8Q9BZF1 889 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 DHX35Q9H5Z1 703 aaKnown RBP12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 HPCAL4Q9UM19 191 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 TMEM150BA6NC51 233 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 ZC3H11AO75152 810 aaKnown RBP eCLIP12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 KRT37O76014 449 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 CYP11B1P15538 503 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 PDGFRAP16234 1089 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 PPM1FP49593 454 aaPredicted RBP12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 PIGHQ14442 188 aaPredicted RBP12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 METTL7BQ6UX53 244 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 C1orf186Q6ZWK4 172 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 RAPH1Q70E73 1250 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 DDX42Q86XP3 938 aaKnown RBP eCLIP12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 WDR91A4D1P6 747 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 C6orf222P0C671 652 aaPredicted RBP12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 CYP2C9P11712 490 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 GZMAP12544 262 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 PTPRAP18433 802 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 CLCN3P51790 818 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 NLRP11P59045 1033 aaKnown RBP12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 CYP24A1Q07973 514 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 HP1BP3Q5SSJ5 553 aaPredicted RBP12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 RWDD4Q6NW29 188 aaKnown RBP12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 FBXO16Q8IX29 292 aaPredicted RBP12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 EFCAB13Q8IY85 973 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 MTMR8Q96EF0 704 aa12.09□□□□□ -0.47
PCDHGC3-201ENST00000308177 CELF4Q9BZC1 486 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms