RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.53□□□□□ -1.25e-17■■■■■ 409.9
PTCD2-201ENST00000308077 APEX2Q9UBZ4 518 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 DNAJC12Q9UKB3 198 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 PPP2R2CQ9Y2T4 447 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 ADGRG1Q9Y653 693 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 NCOR1O75376 2440 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 A0A1B0GUA9 196 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 KRT38O76015 456 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 ERLIN2O94905 339 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 VNN1O95497 513 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 MCF2P10911 925 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 TNNI1P19237 187 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 EIF4BP23588 611 aaKnown RBP7.53□□□□□ -1.2
PTCD2-201ENST00000308077 ACLYP53396 1101 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 TSR1Q2NL82 804 aaKnown RBP7.53□□□□□ -1.2
PTCD2-201ENST00000308077 ZACNQ401N2 412 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 TAF2Q6P1X5 1199 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 CATSPER4Q7RTX7 472 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 USP37Q86T82 979 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 SERINC5Q86VE9 423 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 NME8Q8N427 588 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 FBXL13Q8NEE6 735 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 SYN2Q92777 582 aaPredicted RBP7.53□□□□□ -1.2
PTCD2-201ENST00000308077 KAT5Q92993 513 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 NHEJ1Q9H9Q4 299 aaPredicted RBP7.53□□□□□ -1.2
PTCD2-201ENST00000308077 ZNHIT6Q9NWK9 470 aaKnown RBP7.53□□□□□ -1.2
PTCD2-201ENST00000308077 AIPL1Q9NZN9 384 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 PTPN22Q9Y2R2 807 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 REXO2Q9Y3B8 237 aaKnown RBP7.53□□□□□ -1.2
PTCD2-201ENST00000308077 BRCA2P51587 3418 aa7.53□□□□□ -1.2
PTCD2-201ENST00000308077 TRIP11Q15643 1979 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 CITO14578 2027 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 F8VZ95 297 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 OFD1O75665 1012 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 NDUFA10O95299 355 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 STAG3L1P0CL83 205 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 CXCL8P10145 99 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 EIF4A3P38919 411 aaKnown RBP7.52□□□□□ -1.21
PTCD2-201ENST00000308077 CRYBB1P53674 252 aaPredicted RBP7.52□□□□□ -1.21
PTCD2-201ENST00000308077 MRPS6P82932 125 aaKnown RBP7.52□□□□□ -1.21
PTCD2-201ENST00000308077 CETN1Q12798 172 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 ITGA7Q13683 1181 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 HSP90AA2PQ14568 343 aaPredicted RBP7.52□□□□□ -1.21
PTCD2-201ENST00000308077 DRAP1Q14919 205 aaPredicted RBP7.52□□□□□ -1.21
PTCD2-201ENST00000308077 ASTE1Q2TB18 679 aaPredicted RBP7.52□□□□□ -1.21
PTCD2-201ENST00000308077 IRF2BP2Q7Z5L9 587 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 EFCAB13Q8IY85 973 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 TMEM130Q8N3G9 435 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 DHX38Q92620 1227 aaKnown RBP7.52□□□□□ -1.21
PTCD2-201ENST00000308077 FAM212AQ96EL1 285 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 SPAG5Q96R06 1193 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 PI4K2AQ9BTU6 479 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 EIF2AQ9BY44 585 aaKnown RBP7.52□□□□□ -1.21
PTCD2-201ENST00000308077 STK33Q9BYT3 514 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 CELF4Q9BZC1 486 aaKnown RBP7.52□□□□□ -1.21
PTCD2-201ENST00000308077 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.52□□□□□ -1.21
PTCD2-201ENST00000308077 UNC93B1Q9H1C4 597 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 NUCKS1Q9H1E3 243 aaKnown RBP7.52□□□□□ -1.21
PTCD2-201ENST00000308077 RAB20Q9NX57 234 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 MYO6Q9UM54 1294 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 CDY2AQ9Y6F7 541 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 EPN1Q9Y6I3 576 aaPredicted RBP7.52□□□□□ -1.21
PTCD2-201ENST00000308077 MOXD2PA6NHM9 499 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 ZNF263O14978 683 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 CABYRO75952 493 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 NPTXRO95502 500 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 HLA-DRAP01903 254 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 CTSHP09668 335 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 ARID5AQ03989 594 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 MGAT3Q09327 533 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 MTFR1Q15390 333 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 ASIC2Q16515 512 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 PTGISQ16647 500 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 NYAP1Q6ZVC0 841 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 FAM228AQ86W67 206 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 WDR49Q8IV35 697 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 CCDC170Q8IYT3 715 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 OLIG1Q8TAK6 271 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 HELQQ8TDG4 1101 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 TATDN2Q93075 761 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 C16orf45Q96MC5 204 aaPredicted RBP7.52□□□□□ -1.21
PTCD2-201ENST00000308077 KREMEN1Q96MU8 473 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 OSBPL7Q9BZF2 842 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 MTMR12Q9C0I1 747 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 RPF1Q9H9Y2 349 aaKnown RBP7.52□□□□□ -1.21
PTCD2-201ENST00000308077 UBE2TQ9NPD8 197 aaPredicted RBP7.52□□□□□ -1.21
PTCD2-201ENST00000308077 TRMT13Q9NUP7 481 aaKnown RBP7.52□□□□□ -1.21
PTCD2-201ENST00000308077 NOC2LQ9Y3T9 749 aaKnown RBP7.52□□□□□ -1.21
PTCD2-201ENST00000308077 DAAM1Q9Y4D1 1078 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 TRPV2Q9Y5S1 764 aa7.52□□□□□ -1.21
PTCD2-201ENST00000308077 PDCD11Q14690 1871 aaKnown RBP7.51□□□□□ -1.21
PTCD2-201ENST00000308077 ZNF462Q96JM2 2506 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 FASNP49327 2511 aaKnown RBP7.51□□□□□ -1.21
PTCD2-201ENST00000308077 A0A1W2PQ45 241 aaPredicted RBP7.51□□□□□ -1.21
PTCD2-201ENST00000308077 A0A1W2PQY0 241 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 SSU72P8A0A1W2PR75 194 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 LACTBL1A8MY62 500 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 B4GALT4O60513 344 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 GFPT2O94808 682 aa7.51□□□□□ -1.21
PTCD2-201ENST00000308077 ABL1P00519 1130 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms