RNA–Protein interactions for RNA: ENST00000307297.8

PATJ-201, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 2 BASIC

Gene PATJ, Length 1,585 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-201ENST00000307297 COL4A6Q14031 1691 aa12.02□□□□□ -0.48
PATJ-201ENST00000307297 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.02□□□□□ -0.49
PATJ-201ENST00000307297 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.02□□□□□ -0.49
PATJ-201ENST00000307297 INPPL1O15357 1258 aa12.02□□□□□ -0.49
PATJ-201ENST00000307297 STX10O60499 249 aa12.02□□□□□ -0.49
PATJ-201ENST00000307297 POMCP01189 267 aa12.02□□□□□ -0.49
PATJ-201ENST00000307297 TNNC2P02585 160 aa12.02□□□□□ -0.49
PATJ-201ENST00000307297 KCNE1P15382 129 aa12.02□□□□□ -0.49
PATJ-201ENST00000307297 VAMP7P51809 220 aa12.02□□□□□ -0.49
PATJ-201ENST00000307297 PRPF38BQ5VTL8 546 aaKnown RBP12.02□□□□□ -0.49
PATJ-201ENST00000307297 JADE1Q6IE81 842 aa12.02□□□□□ -0.49
PATJ-201ENST00000307297 FRMD5Q7Z6J6 570 aa12.02□□□□□ -0.49
PATJ-201ENST00000307297 WDR49Q8IV35 697 aa12.02□□□□□ -0.49
PATJ-201ENST00000307297 CMTR2Q8IYT2 770 aaKnown RBP12.02□□□□□ -0.49
PATJ-201ENST00000307297 CRIPAKQ8N1N5 446 aa12.02□□□□□ -0.49
PATJ-201ENST00000307297 BEST2Q8NFU1 509 aa12.02□□□□□ -0.49
PATJ-201ENST00000307297 MFSD14AQ96MC6 490 aa12.02□□□□□ -0.49
PATJ-201ENST00000307297 CASD1Q96PB1 797 aa12.02□□□□□ -0.49
PATJ-201ENST00000307297 CGRRF1Q99675 332 aa12.02□□□□□ -0.49
PATJ-201ENST00000307297 PDE11AQ9HCR9 933 aa12.02□□□□□ -0.49
PATJ-201ENST00000307297 UBQLN1Q9UMX0 589 aaKnown RBP12.02□□□□□ -0.49
PATJ-201ENST00000307297 C2CD2Q9Y426 696 aa12.02□□□□□ -0.49
PATJ-201ENST00000307297 SMIM28A0A1B0GU29 152 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 A0A1W2PPC1 479 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 CARNS1A5YM72 827 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 CDK11BP21127 795 aaKnown RBP12.01□□□□□ -0.49
PATJ-201ENST00000307297 MTIF2P46199 727 aaKnown RBP12.01□□□□□ -0.49
PATJ-201ENST00000307297 GATMP50440 423 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 AP3M2P53677 418 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 HTRA4P83105 476 aaPredicted RBP12.01□□□□□ -0.49
PATJ-201ENST00000307297 TFAMQ00059 246 aaKnown RBP12.01□□□□□ -0.49
PATJ-201ENST00000307297 ENPEPQ07075 957 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 SPAG1Q07617 926 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 RAB30Q15771 203 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 XKR4Q5GH76 650 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 ALKAL1Q6UXT8 129 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 FIBCD1Q8N539 461 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 TMC2Q8TDI7 906 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 ZNF689Q96CS4 500 aaPredicted RBP12.01□□□□□ -0.49
PATJ-201ENST00000307297 CBX8Q9HC52 389 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 RNF19AQ9NV58 838 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 TBC1D13Q9NVG8 400 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 MSRAQ9UJ68 235 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 KCNJ18B7U540 433 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 PTGESO14684 152 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 ZC3H11AO75152 810 aaKnown RBP eCLIP12.01□□□□□ -0.49
PATJ-201ENST00000307297 CLSTN1O94985 981 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 NFICP08651 508 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 EEF1GP26641 437 aaKnown RBP12.01□□□□□ -0.49
PATJ-201ENST00000307297 MARSP56192 900 aaKnown RBP12.01□□□□□ -0.49
PATJ-201ENST00000307297 TUSC3Q13454 348 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 KCNJ12Q14500 433 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 DUOXA2Q1HG44 320 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 HSP90AA4PQ58FG1 418 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 PARD3BQ8TEW8 1205 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 UROC1Q96N76 676 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 PPP1R10Q96QC0 940 aaKnown RBP12.01□□□□□ -0.49
PATJ-201ENST00000307297 MED15Q96RN5 788 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 AAASQ9NRG9 546 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 PCDHA11Q9Y5I1 949 aa12.01□□□□□ -0.49
PATJ-201ENST00000307297 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.01□□□□□ -0.49
PATJ-201ENST00000307297 LRRIQ3A6PVS8 624 aaPredicted RBP12□□□□□ -0.49
PATJ-201ENST00000307297 PES1O00541 588 aaKnown RBP12□□□□□ -0.49
PATJ-201ENST00000307297 PRKCSHP14314 528 aaPredicted RBP12□□□□□ -0.49
PATJ-201ENST00000307297 LAG3P18627 525 aa12□□□□□ -0.49
PATJ-201ENST00000307297 CYP3A5P20815 502 aa12□□□□□ -0.49
PATJ-201ENST00000307297 CETN1Q12798 172 aa12□□□□□ -0.49
PATJ-201ENST00000307297 BIRC3Q13489 604 aa12□□□□□ -0.49
PATJ-201ENST00000307297 LMBRD2Q68DH5 695 aaPredicted RBP12□□□□□ -0.49
PATJ-201ENST00000307297 LUZP1Q86V48 1076 aa12□□□□□ -0.49
PATJ-201ENST00000307297 DHX40Q8IX18 779 aaKnown RBP12□□□□□ -0.49
PATJ-201ENST00000307297 EFCAB13Q8IY85 973 aa12□□□□□ -0.49
PATJ-201ENST00000307297 MTMR12Q9C0I1 747 aa12□□□□□ -0.49
PATJ-201ENST00000307297 MMRN2Q9H8L6 949 aa12□□□□□ -0.49
PATJ-201ENST00000307297 RC3H2Q9HBD1 1191 aaKnown RBP12□□□□□ -0.49
PATJ-201ENST00000307297 SAMSN1Q9NSI8 373 aaKnown RBP12□□□□□ -0.49
PATJ-201ENST00000307297 FANCLQ9NW38 375 aa12□□□□□ -0.49
PATJ-201ENST00000307297 ITGA11Q9UKX5 1188 aa12□□□□□ -0.49
PATJ-201ENST00000307297 RWDD3Q9Y3V2 267 aa12□□□□□ -0.49
PATJ-201ENST00000307297 RANBP2P49792 3224 aaKnown RBP12□□□□□ -0.49
PATJ-201ENST00000307297 CASTOR2A6NHX0 329 aa11.99□□□□□ -0.49
PATJ-201ENST00000307297 GRXCR1A8MXD5 290 aa11.99□□□□□ -0.49
PATJ-201ENST00000307297 N4BP1O75113 896 aaKnown RBP11.99□□□□□ -0.49
PATJ-201ENST00000307297 PHACTR2O75167 634 aa11.99□□□□□ -0.49
PATJ-201ENST00000307297 KRT19P08727 400 aa11.99□□□□□ -0.49
PATJ-201ENST00000307297 TRIM49P0CI25 452 aa11.99□□□□□ -0.49
PATJ-201ENST00000307297 TRIM49CP0CI26 452 aa11.99□□□□□ -0.49
PATJ-201ENST00000307297 GTF2H1P32780 548 aa11.99□□□□□ -0.49
PATJ-201ENST00000307297 OR1G1P47890 313 aa11.99□□□□□ -0.49
PATJ-201ENST00000307297 ALDH7A1P49419 539 aaKnown RBP11.99□□□□□ -0.49
PATJ-201ENST00000307297 AFF1P51825 1210 aaKnown RBP11.99□□□□□ -0.49
PATJ-201ENST00000307297 RABGGTBP53611 331 aa11.99□□□□□ -0.49
PATJ-201ENST00000307297 IQCB1Q15051 598 aa11.99□□□□□ -0.49
PATJ-201ENST00000307297 TCP11X2Q5H9J9 407 aa11.99□□□□□ -0.49
PATJ-201ENST00000307297 CDKAL1Q5VV42 579 aa11.99□□□□□ -0.49
PATJ-201ENST00000307297 GSTCDQ8NEC7 633 aa11.99□□□□□ -0.49
PATJ-201ENST00000307297 DDX27Q96GQ7 796 aaKnown RBP11.99□□□□□ -0.49
PATJ-201ENST00000307297 ZMAT2Q96NC0 199 aaKnown RBP11.99□□□□□ -0.49
PATJ-201ENST00000307297 TMEM175Q9BSA9 504 aa11.99□□□□□ -0.49
PATJ-201ENST00000307297 INTS13Q9NVM9 706 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms