RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 KATNAL1Q9BW62 490 aa16.83■□□□□ 0.29
USP42-201ENST00000306177 KCNH7Q9NS40 1196 aa16.83■□□□□ 0.29
USP42-201ENST00000306177 SALL3Q9BXA9 1300 aa16.83■□□□□ 0.29
USP42-201ENST00000306177 FRMD3A2A2Y4 597 aa16.83■□□□□ 0.29
USP42-201ENST00000306177 TRPA1O75762 1119 aa16.83■□□□□ 0.29
USP42-201ENST00000306177 STMN1P16949 149 aa16.83■□□□□ 0.29
USP42-201ENST00000306177 SLC9A1P19634 815 aa16.83■□□□□ 0.29
USP42-201ENST00000306177 PRAMEP78395 509 aa16.83■□□□□ 0.29
USP42-201ENST00000306177 RAD9BQ6WBX8 426 aa16.83■□□□□ 0.29
USP42-201ENST00000306177 TXNRD3Q86VQ6 643 aa16.83■□□□□ 0.29
USP42-201ENST00000306177 ENGASEQ8NFI3 743 aa16.83■□□□□ 0.29
USP42-201ENST00000306177 LRRC37BQ96QE4 947 aa16.83■□□□□ 0.29
USP42-201ENST00000306177 TMEM8AQ9HCN3 771 aa16.83■□□□□ 0.29
USP42-201ENST00000306177 MAP3K20Q9NYL2 800 aaKnown RBP16.83■□□□□ 0.29
USP42-201ENST00000306177 IGSF9BQ9UPX0 1349 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 SPAG7O75391 227 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 KITP10721 976 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 HSD17B4P51659 736 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 COL23A1Q86Y22 540 aaPredicted RBP16.83■□□□□ 0.28
USP42-201ENST00000306177 NUDCD3Q8IVD9 361 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 LRRC43Q8N309 656 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 CCNYL1Q8N7R7 359 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 TRIM4Q9C037 500 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 ANKEF1Q9NU02 776 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 DEPDC5O75140 1603 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 GYPCP04921 128 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 ARFIP2P53365 341 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 KRT33BQ14525 404 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 CATSPER3Q86XQ3 398 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 MS4A14Q96JA4 679 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 CCDC195A0A1B0GUA6 201 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 PPP1R3GB7ZBB8 358 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 UBE2Q2LH0YL09 131 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 IL18RAPO95256 599 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 FGFR4P22455 802 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 CYP2C19P33261 490 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 POU5F1BQ06416 359 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 NFIAQ12857 509 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 MMS22LQ6ZRQ5 1243 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 RAPGEF5Q92565 580 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 PLEKHA5Q9HAU0 1116 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 SENP1Q9P0U3 644 aa16.83■□□□□ 0.28
USP42-201ENST00000306177 NWD1Q149M9 1564 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 ARHGEF28Q8N1W1 1705 aaKnown RBP16.82■□□□□ 0.28
USP42-201ENST00000306177 NNMTP40261 264 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 SULT1E1P49888 294 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 EZH2Q15910 746 aaKnown RBP16.82■□□□□ 0.28
USP42-201ENST00000306177 GRAMD1BQ3KR37 738 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 RDM1Q8NG50 284 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 ATG4CQ96DT6 458 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 PARK7Q99497 189 aaKnown RBP16.82■□□□□ 0.28
USP42-201ENST00000306177 OLA1Q9NTK5 396 aaKnown RBP16.82■□□□□ 0.28
USP42-201ENST00000306177 PDGFRAP16234 1089 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 TYK2P29597 1187 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 PIGHQ14442 188 aaPredicted RBP16.82■□□□□ 0.28
USP42-201ENST00000306177 HACL1Q9UJ83 578 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 DCTN4Q9UJW0 460 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 DYNC1LI2O43237 492 aaPredicted RBP16.82■□□□□ 0.28
USP42-201ENST00000306177 TRAPPC3O43617 180 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 TPI1P60174 286 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 TADA2BQ86TJ2 420 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 SPON2Q9BUD6 331 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 KLHL11Q9NVR0 708 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 HACD3Q9P035 362 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 PCDHB2Q9Y5E7 798 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 E5RI56 91 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 TAF1CQ15572 869 aaPredicted RBP16.82■□□□□ 0.28
USP42-201ENST00000306177 SLC13A1Q9BZW2 595 aa16.82■□□□□ 0.28
USP42-201ENST00000306177 NOP53Q9NZM5 478 aaKnown RBP16.82■□□□□ 0.28
USP42-201ENST00000306177 MORC2Q9Y6X9 1032 aaPredicted RBP16.82■□□□□ 0.28
USP42-201ENST00000306177 LRRC14Q15048 493 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 SYN2Q92777 582 aaPredicted RBP16.81■□□□□ 0.28
USP42-201ENST00000306177 DFFAO00273 331 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 EXTL3O43909 919 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 HLA-DRAP01903 254 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 TMEM253P0C7T8 217 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 PEX19P40855 299 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 CASP7P55210 303 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 NBPF9Q3BBW0 867 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 HIPK4Q8NE63 616 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 GRAMD1AQ96CP6 724 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 BTBD6Q96KE9 485 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 PRMT6Q96LA8 375 aaPredicted RBP16.81■□□□□ 0.28
USP42-201ENST00000306177 ZDHHC15Q96MV8 337 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 CYTH2Q99418 400 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 RTFDC1Q9BY42 306 aaPredicted RBP16.81■□□□□ 0.28
USP42-201ENST00000306177 TRPV6Q9H1D0 765 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 KCNN4O15554 427 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 MAGEA9P43362 315 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 VEPH1Q14D04 833 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 HABP4Q5JVS0 413 aaKnown RBP16.81■□□□□ 0.28
USP42-201ENST00000306177 TRAPPC11Q7Z392 1133 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 SPATA2LQ8IUW3 424 aaPredicted RBP16.81■□□□□ 0.28
USP42-201ENST00000306177 OR6P1Q8NGX9 317 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 TMEM117Q9H0C3 514 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 ZCCHC17Q9NP64 241 aaKnown RBP16.81■□□□□ 0.28
USP42-201ENST00000306177 KRT82Q9NSB4 513 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 TNS2Q63HR2 1409 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 DPYSL4O14531 572 aa16.81■□□□□ 0.28
USP42-201ENST00000306177 ITIH2P19823 946 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms