RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 PCDHA4Q9UN74 947 aa11.17□□□□□ -0.62
COL4A3-201ENST00000304990 ZMYM2Q9UBW7 1377 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 ZFHX4Q86UP3 3567 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 CYP3A7-CYP3A51PA0A087WV96 503 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 B4GALT5O43286 388 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 PSMC3P17980 439 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 CYP3A7P24462 503 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 CCNE1P24864 410 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 LIMK1P53667 647 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 ARPP19P56211 112 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 PPP2R5CQ13362 524 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 CAPSQ13938 189 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 FAM78AQ5JUQ0 283 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 CYP4A22Q5TCH4 519 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 NCAPH2Q6IBW4 605 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 Q6ZUG5 572 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 C4orf19Q8IY42 314 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 TRIM22Q8IYM9 498 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 BRF1Q92994 677 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 SH3GLB2Q9NR46 395 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 MTRRQ9UBK8 725 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 ZMIZ1Q9ULJ6 1067 aa11.16□□□□□ -0.62
COL4A3-201ENST00000304990 COL4A2P08572 1712 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 CHRNB1P11230 501 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 CYP4A11Q02928 519 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 SPIRE1Q08AE8 756 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 CTTNQ14247 550 aaKnown RBP11.15□□□□□ -0.62
COL4A3-201ENST00000304990 EPHA7Q15375 998 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 ADCK5Q3MIX3 580 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 BMP2KLQ5H9B9 411 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 STPG1Q5TH74 334 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 IQCEQ6IPM2 695 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 PSAPL1Q6NUJ1 521 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 MOXD1Q6UVY6 613 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 UNQ6494/PRO21346Q6UXR6 183 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 ANKS3Q6ZW76 656 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 TPH2Q8IWU9 490 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 BLIDQ8IZY5 108 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 DEPDC1BQ8WUY9 529 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 DYDC2Q96IM9 177 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 FAM20AQ96MK3 541 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 ZSWIM4Q9H7M6 989 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 RGL1Q9NZL6 768 aa11.15□□□□□ -0.62
COL4A3-201ENST00000304990 WRAP73Q9P2S5 460 aaPredicted RBP11.15□□□□□ -0.62
COL4A3-201ENST00000304990 USP24Q9UPU5 2620 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 A0A1B0GUA9 196 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 LRRIQ4A6NIV6 560 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 SHISA7A6NL88 538 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 C1QTNF9BB2RNN3 333 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 TRAPPC3O43617 180 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 SLC37A4O43826 429 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 B3GAT3O94766 335 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 KCNK5O95279 499 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 C1QTNF9P0C862 333 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 CCDC192P0DO97 292 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 MYL4P12829 197 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 HOXB3P14651 431 aaPredicted RBP11.14□□□□□ -0.63
COL4A3-201ENST00000304990 LIG1P18858 919 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 FGFR3P22607 806 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 FCARP24071 287 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 POU5F1BQ06416 359 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 FOXC1Q12948 553 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 PTGDRQ13258 359 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 AMHR2Q16671 573 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 INF2Q27J81 1249 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 C1orf228Q6PIY5 440 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 VITQ6UXI7 678 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 IFNLR1Q8IU57 520 aaPredicted RBP11.14□□□□□ -0.63
COL4A3-201ENST00000304990 ZNF687Q8N1G0 1237 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 ASAP3Q8TDY4 903 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 SMARCD2Q92925 531 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 MSANTD3Q96H12 275 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 ASB16Q96NS5 453 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 ADPGKQ9BRR6 497 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 SLITRK6Q9H5Y7 841 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 CYP4F11Q9HBI6 524 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 TRPV5Q9NQA5 729 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 AVENQ9NQS1 362 aaPredicted RBP11.14□□□□□ -0.63
COL4A3-201ENST00000304990 RBM12Q9NTZ6 932 aaKnown RBP11.14□□□□□ -0.63
COL4A3-201ENST00000304990 SNTG2Q9NY99 539 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 VAV3Q9UKW4 847 aa11.14□□□□□ -0.63
COL4A3-201ENST00000304990 BAHCC1Q9P281 2608 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 CCDC194A0A1B0GVG4 234 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 SLC38A8A6NNN8 435 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 I3L4J1 428 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 N4BP3O15049 544 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 ZBTB39O15060 712 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 DGAT1O75907 488 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 RECQL4O94761 1208 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 BAG4O95429 457 aaKnown RBP11.13□□□□□ -0.63
COL4A3-201ENST00000304990 ZNF806P0C7X5 589 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 CPA1P15085 419 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 TKTP29401 623 aaKnown RBP11.13□□□□□ -0.63
COL4A3-201ENST00000304990 VIPR2P41587 438 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 CCT2P78371 535 aaKnown RBP11.13□□□□□ -0.63
COL4A3-201ENST00000304990 SSRP1Q08945 709 aaKnown RBP11.13□□□□□ -0.63
COL4A3-201ENST00000304990 PRSS36Q5K4E3 855 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 DGKKQ5KSL6 1271 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 RNF43Q68DV7 783 aa11.13□□□□□ -0.63
COL4A3-201ENST00000304990 MAEAQ7L5Y9 396 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms