RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 RPRD1AQ96P16 312 aaPredicted RBP7.54□□□□□ -1.2
RAG1-201ENST00000299440 TSSK1BQ9BXA7 367 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 NT5C1AQ9BXI3 368 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 OSGEPL1Q9H4B0 414 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 DPP3Q9NY33 737 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 ZNF212Q9UDV6 495 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 SLC30A1Q9Y6M5 507 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 ARHGEF40Q8TER5 1519 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 A0A087WZ62 844 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 ARHGAP10A1A4S6 786 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 EBAG9O00559 213 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 LIG3P49916 1009 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 NECTIN1Q15223 517 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 FAM83AQ86UY5 434 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 SCG3Q8WXD2 468 aaKnown RBP7.54□□□□□ -1.2
RAG1-201ENST00000299440 FDXACB1Q9BRP7 624 aaPredicted RBP7.54□□□□□ -1.2
RAG1-201ENST00000299440 GPR63Q9BZJ6 419 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 CYP26B1Q9NR63 512 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 AIPL1Q9NZN9 384 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 AKAP7Q9P0M2 348 aaPredicted RBP7.54□□□□□ -1.2
RAG1-201ENST00000299440 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.54□□□□□ -1.2
RAG1-201ENST00000299440 DIP2CQ9Y2E4 1556 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 RNF40O75150 1001 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 AP1G2O75843 785 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 RALBP11234 206 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 TCP1P17987 556 aaKnown RBP7.54□□□□□ -1.2
RAG1-201ENST00000299440 GUCY1A2P33402 732 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 TUBB2AQ13885 445 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 CAPRIN1Q14444 709 aaKnown RBP7.54□□□□□ -1.2
RAG1-201ENST00000299440 MAPRE1Q15691 268 aaKnown RBP7.54□□□□□ -1.2
RAG1-201ENST00000299440 KIF19Q2TAC6 998 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 NAALADL2Q58DX5 795 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 C3orf67Q6ZVT6 689 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 PTF1AQ7RTS3 328 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 ZC3H18Q86VM9 953 aaKnown RBP7.54□□□□□ -1.2
RAG1-201ENST00000299440 NT5DC4Q86YG4 428 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 PHACTR4Q8IZ21 702 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 PDIK1LQ8N165 341 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 TUBB2BQ9BVA1 445 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 VCXQ9H320 206 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 LATS2Q9NRM7 1088 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 DAAM1Q9Y4D1 1078 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 MST1RQ04912 1400 aa7.54□□□□□ -1.2
RAG1-201ENST00000299440 MT-ND3P03897 115 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 PBLDP30039 288 aaPredicted RBP7.53□□□□□ -1.2
RAG1-201ENST00000299440 SOX10P56693 466 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 MDM2Q00987 491 aaPredicted RBP7.53□□□□□ -1.2
RAG1-201ENST00000299440 ORC1Q13415 861 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 POLD3Q15054 466 aaPredicted RBP7.53□□□□□ -1.2
RAG1-201ENST00000299440 XRRA1Q6P2D8 792 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 OTOP2Q7RTS6 562 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 SLC25A41Q8N5S1 370 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 TTC8Q8TAM2 541 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 CCHCR1Q8TD31 782 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 RUNDC3BQ96NL0 473 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 HAUS4Q9H6D7 363 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 TTC7AQ9ULT0 858 aaPredicted RBP7.53□□□□□ -1.2
RAG1-201ENST00000299440 ZKSCAN5Q9Y2L8 839 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 CPS1P31327 1500 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 ADAMTS13Q76LX8 1427 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 CHGBP05060 677 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 CLTAP09496 248 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 EFEMP1Q12805 493 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 RCN2Q14257 317 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 RBBP7Q16576 425 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 DBN1Q16643 649 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 SYCP2LQ5T4T6 812 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 SIRT2Q8IXJ6 389 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 KRT222Q8N1A0 295 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 ASAP3Q8TDY4 903 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 PYROXD1Q8WU10 500 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 RBM41Q96IZ5 413 aaKnown RBP7.53□□□□□ -1.2
RAG1-201ENST00000299440 ZBTB18Q99592 522 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 MADDQ8WXG6 1647 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 PTPRUQ92729 1446 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 ZRANB2O95218 330 aaKnown RBP eCLIP7.53□□□□□ -1.2
RAG1-201ENST00000299440 HIST1H2AGP0C0S8 130 aaPredicted RBP7.53□□□□□ -1.2
RAG1-201ENST00000299440 INSRRP14616 1297 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 HIST1H2ADP20671 130 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 U2AF2P26368 475 aaKnown RBP eCLIP7.53□□□□□ -1.2
RAG1-201ENST00000299440 PNPLA4P41247 253 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 PPP3CCP48454 512 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 CTCFP49711 727 aaPredicted RBP7.53□□□□□ -1.2
RAG1-201ENST00000299440 DRAP1Q14919 205 aaPredicted RBP7.53□□□□□ -1.2
RAG1-201ENST00000299440 SGSM1Q2NKQ1 1148 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 ARHGAP18Q8N392 663 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 LRRC8CQ8TDW0 803 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 GIPC2Q8TF65 315 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 ATXN7L3BQ96GX2 97 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 CLMNQ96JQ2 1002 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 HIST1H2AHQ96KK5 128 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 HIST1H2AJQ99878 128 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 H2AFJQ9BTM1 129 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 NUP85Q9BW27 656 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 KANSL3Q9P2N6 904 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 ATP1A1P05023 1023 aaKnown RBP7.53□□□□□ -1.2
RAG1-201ENST00000299440 ELAVL2Q12926 359 aaKnown RBP7.53□□□□□ -1.2
RAG1-201ENST00000299440 TCEA2Q15560 299 aa7.53□□□□□ -1.2
RAG1-201ENST00000299440 KIAA1324Q6UXG2 1013 aaKnown RBP7.53□□□□□ -1.2
RAG1-201ENST00000299440 GPATCH11Q8N954 259 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms