RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 LAYNQ6UX15 382 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 CCDC60Q8IWA6 550 aaPredicted RBP15.62■□□□□ 0.09
SCN3B-201ENST00000299333 FAM162AQ96A26 154 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 SOX13Q9UN79 622 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 E2F8A0AVK6 867 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 HNRNPRO43390 633 aaKnown RBP15.62■□□□□ 0.09
SCN3B-201ENST00000299333 EIF3EP60228 445 aaKnown RBP15.62■□□□□ 0.09
SCN3B-201ENST00000299333 ACTR2P61160 394 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 EEPD1Q7L9B9 569 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 DHX35Q9H5Z1 703 aaKnown RBP15.62■□□□□ 0.09
SCN3B-201ENST00000299333 HPS4Q9NQG7 708 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 HERC5Q9UII4 1024 aaKnown RBP15.62■□□□□ 0.09
SCN3B-201ENST00000299333 PFASO15067 1338 aa15.62■□□□□ 0.09
SCN3B-201ENST00000299333 PNMA6FA0A0J9YX94 578 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 PVALEFA0A1B0GWK0 134 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 FAM200BP0CF97 657 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 P3H2Q8IVL5 708 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 DKK3Q9UBP4 350 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 FAM32AQ9Y421 112 aaKnown RBP15.61■□□□□ 0.09
SCN3B-201ENST00000299333 AP4S1Q9Y587 144 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 AP1G2O75843 785 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 CDH6P55285 790 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 LRRC74AQ0VAA2 488 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 TAS2R42Q7RTR8 314 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 DDI1Q8WTU0 396 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 ARHGEF1Q92888 912 aaKnown RBP15.61■□□□□ 0.09
SCN3B-201ENST00000299333 EIF4G3O43432 1585 aaKnown RBP15.61■□□□□ 0.09
SCN3B-201ENST00000299333 YEATS2Q9ULM3 1422 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 ITPRIPL1Q6GPH6 555 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 SH3GLB2Q9NR46 395 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 CDYLQ9Y232 598 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 TBX22Q9Y458 520 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 CLDN3O15551 220 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 TRADDQ15628 312 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 PLEKHA7Q6IQ23 1121 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 LRRC34Q8IZ02 419 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 CEP95Q96GE4 821 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 MOSPD1Q9UJG1 213 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 ZDHHC9Q9Y397 364 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 ALBP02768 609 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 EAPPQ56P03 285 aaPredicted RBP15.61■□□□□ 0.09
SCN3B-201ENST00000299333 DCAF15Q66K64 600 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 PCYOX1LQ8NBM8 494 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 RIN3Q8TB24 985 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 SHCBP1LQ9BZQ2 653 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 KANSL2Q9H9L4 492 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 NEU2Q9Y3R4 380 aa15.61■□□□□ 0.09
SCN3B-201ENST00000299333 CLASP1Q7Z460 1538 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 ZNF263O14978 683 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 ITIH2P19823 946 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 CIITAP33076 1130 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 HSPA13P48723 471 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 MTHFD1LQ6UB35 978 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 RASGRP2Q7LDG7 609 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 PID1Q7Z2X4 250 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 PGBD4Q96DM1 585 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 MANSC1Q9H8J5 431 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 SAMD9Q5K651 1589 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 SLC16A4O15374 487 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 PTK7Q13308 1070 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 MAPRE1Q15691 268 aaKnown RBP15.6■□□□□ 0.09
SCN3B-201ENST00000299333 Q4G0T1 1027 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 SYDE1Q6ZW31 735 aaPredicted RBP15.6■□□□□ 0.09
SCN3B-201ENST00000299333 TRIM69Q86WT6 500 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 NOA1Q8NC60 698 aaKnown RBP15.6■□□□□ 0.09
SCN3B-201ENST00000299333 SLC8A2Q9UPR5 921 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 PP2D1A8MPX8 630 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 KCNN4O15554 427 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 PDHBP11177 359 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 FCER1AP12319 257 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 NLRP11P59045 1033 aaKnown RBP15.6■□□□□ 0.09
SCN3B-201ENST00000299333 NME3Q13232 169 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 ARHGAP17Q68EM7 881 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 KDELC2Q7Z4H8 507 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 MCRS1Q96EZ8 462 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 CDHR1Q96JP9 859 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 IL1RAPL1Q9NZN1 696 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 PRPF4O43172 522 aaKnown RBP eCLIP15.6■□□□□ 0.09
SCN3B-201ENST00000299333 TRIM49P0CI25 452 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 TRIM49CP0CI26 452 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 EIF2AK2P19525 551 aaKnown RBP15.6■□□□□ 0.09
SCN3B-201ENST00000299333 SCTRP47872 440 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 SHC4Q6S5L8 630 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 GLMNQ92990 594 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 OSBPL8Q9BZF1 889 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 HAO1Q9UJM8 370 aa15.6■□□□□ 0.09
SCN3B-201ENST00000299333 RNF103O00237 685 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 USP1O94782 785 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 TOMM70O94826 608 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 HMOX2P30519 316 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 TXNRD1Q16881 649 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 SPDYAQ5MJ70 313 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 KIAA1841Q6NSI8 718 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 NLRP10Q86W26 655 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 SLC35G2Q8TBE7 412 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 AGPAT1Q99943 283 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 ARHGEF5Q12774 1597 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 CLRN2A0PK11 232 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 E7ENQ6 273 aa15.59■□□□□ 0.09
SCN3B-201ENST00000299333 DNALI1O14645 258 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms