RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 MS4A14Q96JA4 679 aa27.61■■■□□ 2.01
SDCCAG3-201ENST00000298537 ANKZF1Q9H8Y5 726 aa27.61■■■□□ 2.01
SDCCAG3-201ENST00000298537 CLSTN1O94985 981 aa27.6■■■□□ 2.01
SDCCAG3-201ENST00000298537 RHOXF2BP0C7M4 288 aa27.6■■■□□ 2.01
SDCCAG3-201ENST00000298537 H2AFXP16104 143 aaPredicted RBP27.6■■■□□ 2.01
SDCCAG3-201ENST00000298537 EFCAB13Q8IY85 973 aa27.6■■■□□ 2.01
SDCCAG3-201ENST00000298537 MSL3Q8N5Y2 521 aaKnown RBP27.6■■■□□ 2.01
SDCCAG3-201ENST00000298537 TPCN2Q8NHX9 752 aa27.6■■■□□ 2.01
SDCCAG3-201ENST00000298537 NLRP7Q8WX94 980 aa27.6■■■□□ 2.01
SDCCAG3-201ENST00000298537 RHOXF2Q9BQY4 288 aa27.6■■■□□ 2.01
SDCCAG3-201ENST00000298537 FAM49AQ9H0Q0 323 aaPredicted RBP27.6■■■□□ 2.01
SDCCAG3-201ENST00000298537 ZFYVE28Q9HCC9 887 aa27.6■■■□□ 2.01
SDCCAG3-201ENST00000298537 ZCCHC17Q9NP64 241 aaKnown RBP27.6■■■□□ 2.01
SDCCAG3-201ENST00000298537 GINS2Q9Y248 185 aa27.6■■■□□ 2.01
SDCCAG3-201ENST00000298537 CXCL8P10145 99 aa27.59■■■□□ 2.01
SDCCAG3-201ENST00000298537 LRRC57Q8N9N7 239 aa27.59■■■□□ 2.01
SDCCAG3-201ENST00000298537 HYOU1Q9Y4L1 999 aa27.59■■■□□ 2.01
SDCCAG3-201ENST00000298537 PHKA2P46019 1235 aa27.59■■■□□ 2.01
SDCCAG3-201ENST00000298537 GCNT1Q02742 428 aa27.59■■■□□ 2.01
SDCCAG3-201ENST00000298537 MEI1Q5TIA1 1274 aa27.59■■■□□ 2.01
SDCCAG3-201ENST00000298537 PAXIP1Q6ZW49 1069 aaPredicted RBP27.59■■■□□ 2.01
SDCCAG3-201ENST00000298537 SLC35G2Q8TBE7 412 aa27.59■■■□□ 2.01
SDCCAG3-201ENST00000298537 DDX1Q92499 740 aaKnown RBP27.59■■■□□ 2.01
SDCCAG3-201ENST00000298537 TBC1D8O95759 1140 aa27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 FTLP02792 175 aaPredicted RBP27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 NCOA4Q13772 614 aa27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 KIZQ2M2Z5 673 aa27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 RABGGTAQ92696 567 aa27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 PNKPQ96T60 521 aa27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 PARD6BQ9BYG5 372 aa27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 CDHR5Q9HBB8 845 aa27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 COG5Q9UP83 839 aa27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 MGAMO43451 1857 aa27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 COL1A2P08123 1366 aa27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 ATMINO43313 823 aaPredicted RBP27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 PHACTR2O75167 634 aa27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 ARF4P18085 180 aaPredicted RBP27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 SSTR3P32745 418 aaPredicted RBP27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 CLCN6P51797 869 aa27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 CAP1Q01518 475 aa27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 WDR44Q5JSH3 913 aa27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 CYP4F22Q6NT55 531 aa27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 CAGE1Q8TC20 777 aa27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 TNFSF13BQ9Y275 285 aa27.58■■■□□ 2.01
SDCCAG3-201ENST00000298537 SMIM10L2AP0DMW4 78 aa27.57■■■□□ 2
SDCCAG3-201ENST00000298537 SMIM10L2BP0DMW5 78 aa27.57■■■□□ 2
SDCCAG3-201ENST00000298537 ZNF200P98182 395 aaPredicted RBP27.57■■■□□ 2
SDCCAG3-201ENST00000298537 TFAMQ00059 246 aaKnown RBP27.57■■■□□ 2
SDCCAG3-201ENST00000298537 C2orf54Q08AI8 447 aa27.57■■■□□ 2
SDCCAG3-201ENST00000298537 SCLT1Q96NL6 688 aa27.57■■■□□ 2
SDCCAG3-201ENST00000298537 NFKBIZQ9BYH8 718 aa27.57■■■□□ 2
SDCCAG3-201ENST00000298537 PDZD7Q9H5P4 517 aa27.57■■■□□ 2
SDCCAG3-201ENST00000298537 ZNF446Q9NWS9 450 aa27.57■■■□□ 2
SDCCAG3-201ENST00000298537 TMEM253P0C7T8 217 aa27.57■■■□□ 2
SDCCAG3-201ENST00000298537 ACO1P21399 889 aaKnown RBP27.57■■■□□ 2
SDCCAG3-201ENST00000298537 TMOD1P28289 359 aa27.57■■■□□ 2
SDCCAG3-201ENST00000298537 RGS2P41220 211 aa27.57■■■□□ 2
SDCCAG3-201ENST00000298537 NOP14P78316 857 aaKnown RBP27.57■■■□□ 2
SDCCAG3-201ENST00000298537 VTI1AQ96AJ9 217 aa27.57■■■□□ 2
SDCCAG3-201ENST00000298537 PRMT7Q9NVM4 692 aaPredicted RBP27.57■■■□□ 2
SDCCAG3-201ENST00000298537 KAT6AQ92794 2004 aa27.56■■■□□ 2
SDCCAG3-201ENST00000298537 ZC3H11AO75152 810 aaKnown RBP eCLIP27.56■■■□□ 28e-6■■■■□ 20.1
SDCCAG3-201ENST00000298537 F2P00734 622 aa27.56■■■□□ 2
SDCCAG3-201ENST00000298537 CFHP08603 1231 aa27.56■■■□□ 2
SDCCAG3-201ENST00000298537 MYL6P60660 151 aa27.56■■■□□ 2
SDCCAG3-201ENST00000298537 RUFY4Q6ZNE9 571 aa27.56■■■□□ 2
SDCCAG3-201ENST00000298537 WDR49Q8IV35 697 aa27.56■■■□□ 2
SDCCAG3-201ENST00000298537 FMNL3Q8IVF7 1028 aa27.56■■■□□ 2
SDCCAG3-201ENST00000298537 TRPV1Q8NER1 839 aa27.56■■■□□ 2
SDCCAG3-201ENST00000298537 INTUQ9ULD6 942 aa27.56■■■□□ 2
SDCCAG3-201ENST00000298537 CUL2Q13617 745 aa27.56■■■□□ 2
SDCCAG3-201ENST00000298537 GPR161Q8N6U8 529 aaKnown RBP27.56■■■□□ 2
SDCCAG3-201ENST00000298537 APBA2Q99767 749 aa27.56■■■□□ 2
SDCCAG3-201ENST00000298537 GABRQQ9UN88 632 aa27.56■■■□□ 2
SDCCAG3-201ENST00000298537 IGHA2P01877 340 aa27.55■■■□□ 2
SDCCAG3-201ENST00000298537 PDE6CP51160 858 aa27.55■■■□□ 2
SDCCAG3-201ENST00000298537 INHBEP58166 350 aa27.55■■■□□ 2
SDCCAG3-201ENST00000298537 RNASE9P60153 205 aaKnown RBP27.55■■■□□ 2
SDCCAG3-201ENST00000298537 MRPS25P82663 173 aaKnown RBP27.55■■■□□ 2
SDCCAG3-201ENST00000298537 CTNNBL1Q8WYA6 563 aaPredicted RBP27.55■■■□□ 2
SDCCAG3-201ENST00000298537 ISCUQ9H1K1 167 aa27.55■■■□□ 2
SDCCAG3-201ENST00000298537 MYADML2A6NDP7 307 aa27.55■■■□□ 2
SDCCAG3-201ENST00000298537 IFNLR1Q8IU57 520 aaPredicted RBP27.55■■■□□ 2
SDCCAG3-201ENST00000298537 NCANO14594 1321 aa27.54■■■□□ 2
SDCCAG3-201ENST00000298537 BUB1BO60566 1050 aaPredicted RBP27.54■■■□□ 2
SDCCAG3-201ENST00000298537 SEC31AO94979 1220 aaKnown RBP27.54■■■□□ 2
SDCCAG3-201ENST00000298537 MYL3P08590 195 aa27.54■■■□□ 2
SDCCAG3-201ENST00000298537 CLTAP09496 248 aa27.54■■■□□ 2
SDCCAG3-201ENST00000298537 CDR2Q01850 454 aa27.54■■■□□ 2
SDCCAG3-201ENST00000298537 RFFLQ8WZ73 363 aa27.54■■■□□ 2
SDCCAG3-201ENST00000298537 MAP7D2Q96T17 732 aa27.54■■■□□ 2
SDCCAG3-201ENST00000298537 HINFPQ9BQA5 517 aa27.54■■■□□ 2
SDCCAG3-201ENST00000298537 ANKRD62A6NC57 917 aa27.53■■■□□ 2
SDCCAG3-201ENST00000298537 TSPAN1O60635 241 aa27.53■■■□□ 2
SDCCAG3-201ENST00000298537 NFICP08651 508 aa27.53■■■□□ 2
SDCCAG3-201ENST00000298537 PRLRP16471 622 aa27.53■■■□□ 2
SDCCAG3-201ENST00000298537 POU5F1BQ06416 359 aa27.53■■■□□ 2
SDCCAG3-201ENST00000298537 FAM187BQ17R55 369 aa27.53■■■□□ 2
SDCCAG3-201ENST00000298537 CXCL16Q9H2A7 254 aa27.53■■■□□ 2
SDCCAG3-201ENST00000298537 A0A0A6YYK5 440 aaPredicted RBP27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms