RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 PPHLN1Q8NEY8 458 aaKnown RBP16.3■□□□□ 0.2
FNDC1-201ENST00000297267 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.3■□□□□ 0.2
FNDC1-201ENST00000297267 ZIM3Q96PE6 472 aa16.3■□□□□ 0.2
FNDC1-201ENST00000297267 MRPL4Q9BYD3 311 aaKnown RBP16.3■□□□□ 0.2
FNDC1-201ENST00000297267 KCNA2P16389 499 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 CHRNA3P32297 505 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 EXOSC10Q01780 885 aaKnown RBP16.29■□□□□ 0.2
FNDC1-201ENST00000297267 BAATQ14032 418 aaPredicted RBP16.29■□□□□ 0.2
FNDC1-201ENST00000297267 DGKHQ86XP1 1220 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 CNBD2Q96M20 576 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 EFHD1Q9BUP0 239 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 PARVAQ9NVD7 372 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 SMNDC1O75940 238 aaKnown RBP eCLIP16.29■□□□□ 0.2
FNDC1-201ENST00000297267 UPF3AQ9H1J1 476 aaKnown RBP16.29■□□□□ 0.2
FNDC1-201ENST00000297267 ARHGEF40Q8TER5 1519 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 ASNSP08243 561 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 DACH2Q96NX9 599 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 COG2Q14746 738 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 SLC9A5Q14940 896 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 HIF1AQ16665 826 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 KCNT1Q5JUK3 1230 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 ZNF579Q8NAF0 562 aaKnown RBP16.29■□□□□ 0.2
FNDC1-201ENST00000297267 SGF29Q96ES7 293 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 RAB6BQ9NRW1 208 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 STXBP3O00186 592 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 RPS6KA4O75676 772 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 PRKCBP05771 671 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 EZH2Q15910 746 aaKnown RBP16.29■□□□□ 0.2
FNDC1-201ENST00000297267 FOXP4Q8IVH2 680 aaPredicted RBP16.29■□□□□ 0.2
FNDC1-201ENST00000297267 FAM71DQ8N9W8 422 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 C18orf8Q96DM3 657 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 SEPT5Q99719 369 aaPredicted RBP16.29■□□□□ 0.2
FNDC1-201ENST00000297267 OSBPL5Q9H0X9 879 aaPredicted RBP16.29■□□□□ 0.2
FNDC1-201ENST00000297267 GYPCP04921 128 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 PGM1P36871 562 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 TSPY1Q01534 308 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 LRRC74AQ0VAA2 488 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 RC3H1Q5TC82 1133 aaKnown RBP16.29■□□□□ 0.2
FNDC1-201ENST00000297267 KRT39Q6A163 491 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 SH3KBP1Q96B97 665 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 THTPAQ9BU02 230 aa16.29■□□□□ 0.2
FNDC1-201ENST00000297267 STK36Q9NRP7 1315 aa16.28■□□□□ 0.2
FNDC1-201ENST00000297267 PRR23AA6NEV1 266 aa16.28■□□□□ 0.2
FNDC1-201ENST00000297267 AP3B2Q13367 1082 aa16.28■□□□□ 0.2
FNDC1-201ENST00000297267 EFHBQ8N7U6 833 aa16.28■□□□□ 0.2
FNDC1-201ENST00000297267 CDHR1Q96JP9 859 aa16.28■□□□□ 0.2
FNDC1-201ENST00000297267 PNKPQ96T60 521 aa16.28■□□□□ 0.2
FNDC1-201ENST00000297267 MORF4L2Q15014 288 aa16.28■□□□□ 0.2
FNDC1-201ENST00000297267 MROH9Q5TGP6 573 aa16.28■□□□□ 0.2
FNDC1-201ENST00000297267 EPS8L3Q8TE67 593 aaKnown RBP16.28■□□□□ 0.2
FNDC1-201ENST00000297267 HECW2Q9P2P5 1572 aa16.28■□□□□ 0.2
FNDC1-201ENST00000297267 MYO3AQ8NEV4 1616 aa16.28■□□□□ 0.2
FNDC1-201ENST00000297267 LDHAP00338 332 aaKnown RBP16.28■□□□□ 0.2
FNDC1-201ENST00000297267 TFRCP02786 760 aaKnown RBP16.28■□□□□ 0.2
FNDC1-201ENST00000297267 HSPA9P38646 679 aaKnown RBP16.28■□□□□ 0.2
FNDC1-201ENST00000297267 FAM180AQ6UWF9 173 aa16.28■□□□□ 0.2
FNDC1-201ENST00000297267 XPO1O14980 1071 aaKnown RBP16.28■□□□□ 0.2
FNDC1-201ENST00000297267 NSUN6Q8TEA1 469 aaKnown RBP16.28■□□□□ 0.2
FNDC1-201ENST00000297267 SUN2Q9UH99 717 aa16.28■□□□□ 0.2
FNDC1-201ENST00000297267 SGPL1O95470 568 aa16.28■□□□□ 0.2
FNDC1-201ENST00000297267 AP2B1P63010 937 aa16.28■□□□□ 0.2
FNDC1-201ENST00000297267 ACBD5Q5T8D3 534 aaPredicted RBP16.28■□□□□ 0.2
FNDC1-201ENST00000297267 CDC42EP5Q6NZY7 148 aa16.28■□□□□ 0.2
FNDC1-201ENST00000297267 WNT8AQ9H1J5 351 aa16.28■□□□□ 0.2
FNDC1-201ENST00000297267 TRAF3IP3Q9Y228 551 aa16.28■□□□□ 0.2
FNDC1-201ENST00000297267 LOC100653049A0A140TA62 436 aa16.27■□□□□ 0.2
FNDC1-201ENST00000297267 KRT34O76011 436 aa16.27■□□□□ 0.2
FNDC1-201ENST00000297267 CALB1P05937 261 aa16.27■□□□□ 0.2
FNDC1-201ENST00000297267 GTF2H1P32780 548 aa16.27■□□□□ 0.2
FNDC1-201ENST00000297267 PAN2Q504Q3 1202 aaKnown RBP16.27■□□□□ 0.2
FNDC1-201ENST00000297267 SLC10A5Q5PT55 438 aa16.27■□□□□ 0.2
FNDC1-201ENST00000297267 ASIC4Q96FT7 647 aa16.27■□□□□ 0.2
FNDC1-201ENST00000297267 ALKQ9UM73 1620 aa16.27■□□□□ 0.2
FNDC1-201ENST00000297267 RTN2O75298 545 aa16.27■□□□□ 0.2
FNDC1-201ENST00000297267 FDPSP14324 419 aaKnown RBP16.27■□□□□ 0.2
FNDC1-201ENST00000297267 COMTP21964 271 aa16.27■□□□□ 0.2
FNDC1-201ENST00000297267 JPH1Q9HDC5 661 aaPredicted RBP16.27■□□□□ 0.2
FNDC1-201ENST00000297267 SNX12Q9UMY4 172 aa16.27■□□□□ 0.2
FNDC1-201ENST00000297267 ABCA6Q8N139 1617 aa16.27■□□□□ 0.2
FNDC1-201ENST00000297267 hCG_1984214I3L0E3 225 aa16.27■□□□□ 0.2
FNDC1-201ENST00000297267 TXNP10599 105 aaKnown RBP16.27■□□□□ 0.2
FNDC1-201ENST00000297267 NPEPPSP55786 919 aa16.27■□□□□ 0.2
FNDC1-201ENST00000297267 NR1I3Q14994 352 aa16.27■□□□□ 0.2
FNDC1-201ENST00000297267 ZNF713Q8N859 430 aaPredicted RBP16.27■□□□□ 0.2
FNDC1-201ENST00000297267 TC2NQ8N9U0 490 aa16.27■□□□□ 0.2
FNDC1-201ENST00000297267 MORC2Q9Y6X9 1032 aaPredicted RBP16.27■□□□□ 0.2
FNDC1-201ENST00000297267 ABCC3O15438 1527 aa16.27■□□□□ 0.2
FNDC1-201ENST00000297267 ADCY3O60266 1144 aa16.27■□□□□ 0.19
FNDC1-201ENST00000297267 NPTXRO95502 500 aa16.27■□□□□ 0.19
FNDC1-201ENST00000297267 GOLGA7BQ2TAP0 167 aa16.27■□□□□ 0.19
FNDC1-201ENST00000297267 RHOT1Q8IXI2 618 aa16.27■□□□□ 0.19
FNDC1-201ENST00000297267 DIS3LQ8TF46 1054 aaKnown RBP16.27■□□□□ 0.19
FNDC1-201ENST00000297267 CEP41Q9BYV8 373 aa16.27■□□□□ 0.19
FNDC1-201ENST00000297267 GPATCH2LQ9NWQ4 482 aa16.27■□□□□ 0.19
FNDC1-201ENST00000297267 ITGA8P53708 1063 aa16.27■□□□□ 0.19
FNDC1-201ENST00000297267 ZC3H12BQ5HYM0 836 aaKnown RBP16.27■□□□□ 0.19
FNDC1-201ENST00000297267 MICALL2Q8IY33 904 aa16.27■□□□□ 0.19
FNDC1-201ENST00000297267 PABPC5Q96DU9 382 aaKnown RBP16.27■□□□□ 0.19
FNDC1-201ENST00000297267 NARFQ9UHQ1 456 aa16.27■□□□□ 0.19
FNDC1-201ENST00000297267 TLR2O60603 784 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms