RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 SPAG1Q07617 926 aa10.71□□□□□ -0.69
CCDC58-201ENST00000291458 TUSC3Q13454 348 aa10.71□□□□□ -0.69
CCDC58-201ENST00000291458 CBX2Q14781 532 aaPredicted RBP10.71□□□□□ -0.69
CCDC58-201ENST00000291458 NOLC1Q14978 699 aaKnown RBP eCLIP10.71□□□□□ -0.69
CCDC58-201ENST00000291458 TPRNQ4KMQ1 711 aa10.71□□□□□ -0.69
CCDC58-201ENST00000291458 ARSHQ5FYA8 562 aa10.71□□□□□ -0.69
CCDC58-201ENST00000291458 TMC5Q6UXY8 1006 aa10.71□□□□□ -0.69
CCDC58-201ENST00000291458 SPATA31D4Q6ZUB0 917 aa10.71□□□□□ -0.69
CCDC58-201ENST00000291458 DYMQ7RTS9 669 aa10.71□□□□□ -0.69
CCDC58-201ENST00000291458 PDILTQ8N807 584 aa10.71□□□□□ -0.69
CCDC58-201ENST00000291458 ANKK1Q8NFD2 765 aa10.71□□□□□ -0.69
CCDC58-201ENST00000291458 RIN2Q8WYP3 895 aaPredicted RBP10.71□□□□□ -0.69
CCDC58-201ENST00000291458 WNT2BQ93097 391 aa10.71□□□□□ -0.69
CCDC58-201ENST00000291458 RNF166Q96A37 237 aaPredicted RBP10.71□□□□□ -0.69
CCDC58-201ENST00000291458 KLHL5Q96PQ7 755 aa10.71□□□□□ -0.69
CCDC58-201ENST00000291458 POP1Q99575 1024 aaKnown RBP10.71□□□□□ -0.69
CCDC58-201ENST00000291458 EMILIN2Q9BXX0 1053 aa10.71□□□□□ -0.69
CCDC58-201ENST00000291458 GPR62Q9BZJ7 368 aa10.71□□□□□ -0.69
CCDC58-201ENST00000291458 MAN1C1Q9NR34 630 aa10.71□□□□□ -0.69
CCDC58-201ENST00000291458 TBC1D7Q9P0N9 293 aa10.71□□□□□ -0.69
CCDC58-201ENST00000291458 TFIP11Q9UBB9 837 aaKnown RBP10.71□□□□□ -0.69
CCDC58-201ENST00000291458 DAXXQ9UER7 740 aaPredicted RBP10.71□□□□□ -0.69
CCDC58-201ENST00000291458 NCOR1O75376 2440 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 DENND4AQ7Z401 1863 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 SF3B1O75533 1304 aaKnown RBP eCLIP10.7□□□□□ -0.7
CCDC58-201ENST00000291458 CARNS1A5YM72 827 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 I3L4J1 428 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 HNRNPDLO14979 420 aaKnown RBP10.7□□□□□ -0.7
CCDC58-201ENST00000291458 TEX28O15482 410 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 IGFBP6P24592 240 aaPredicted RBP10.7□□□□□ -0.7
CCDC58-201ENST00000291458 NMT1P30419 496 aaKnown RBP10.7□□□□□ -0.7
CCDC58-201ENST00000291458 LIG4P49917 911 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 PKP1Q13835 747 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 KCNC3Q14003 757 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 RRAGBQ5VZM2 374 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 MPZL3Q6UWV2 235 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 HAUS6Q7Z4H7 955 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 SFR1Q86XK3 245 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 PALB2Q86YC2 1186 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 TMEM161BQ8NDZ6 487 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 SNX21Q969T3 373 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 SNX27Q96L92 541 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 FBXL18Q96ME1 805 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 TIPINQ9BVW5 301 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 POMKQ9H5K3 350 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 TMEM134Q9H6X4 195 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 CCDC39Q9UFE4 941 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 PRKAG3Q9UGI9 489 aa10.7□□□□□ -0.7
CCDC58-201ENST00000291458 RBM19Q9Y4C8 960 aaKnown RBP10.7□□□□□ -0.7
CCDC58-201ENST00000291458 ZMYM2Q9UBW7 1377 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 A0A087X0B3 334 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 DCXO43602 365 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 ADH1AP07327 375 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 CXCL8P10145 99 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 MCF2P10911 925 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 IDEP14735 1019 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 GRM5P41594 1212 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 STAT6P42226 847 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 BRCC3P46736 316 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 CLCNKBP51801 687 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 NCKAP1LP55160 1127 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 SOX4Q06945 474 aaPredicted RBP10.69□□□□□ -0.7
CCDC58-201ENST00000291458 GIT2Q14161 759 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 ZC2HC1CQ53FD0 456 aaPredicted RBP10.69□□□□□ -0.7
CCDC58-201ENST00000291458 RTP2Q5QGT7 225 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 ZBTB41Q5SVQ8 909 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 FAM171A1Q5VUB5 890 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 CES5AQ6NT32 575 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 RNF135Q8IUD6 432 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 NOC3LQ8WTT2 800 aaKnown RBP10.69□□□□□ -0.7
CCDC58-201ENST00000291458 SLC22A17Q8WUG5 538 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 SPIRE2Q8WWL2 714 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 SUSD6Q92537 303 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 STAMQ92783 540 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 C18orf25Q96B23 403 aaPredicted RBP10.69□□□□□ -0.7
CCDC58-201ENST00000291458 PHF7Q9BWX1 381 aaPredicted RBP10.69□□□□□ -0.7
CCDC58-201ENST00000291458 CCSER1Q9C0I3 900 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 S1PR5Q9H228 398 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 ZSCAN16Q9H4T2 348 aaPredicted RBP10.69□□□□□ -0.7
CCDC58-201ENST00000291458 PARVGQ9HBI0 331 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 TOPORSQ9NS56 1045 aaPredicted RBP10.69□□□□□ -0.7
CCDC58-201ENST00000291458 DZANK1Q9NVP4 752 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 KCND2Q9NZV8 630 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 LARSQ9P2J5 1176 aaKnown RBP10.69□□□□□ -0.7
CCDC58-201ENST00000291458 ODF2LQ9ULJ1 636 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 SRPRBQ9Y5M8 271 aaKnown RBP10.69□□□□□ -0.7
CCDC58-201ENST00000291458 A0A0C4DFX4 3053 aa10.69□□□□□ -0.7
CCDC58-201ENST00000291458 ANK1P16157 1881 aa10.68□□□□□ -0.7
CCDC58-201ENST00000291458 RCCD1A6NED2 376 aa10.68□□□□□ -0.7
CCDC58-201ENST00000291458 TISP43B9A030 160 aa10.68□□□□□ -0.7
CCDC58-201ENST00000291458 ABLIM1O14639 778 aa10.68□□□□□ -0.7
CCDC58-201ENST00000291458 SPTLC2O15270 562 aa10.68□□□□□ -0.7
CCDC58-201ENST00000291458 SLC26A4O43511 780 aa10.68□□□□□ -0.7
CCDC58-201ENST00000291458 TRAK2O60296 914 aa10.68□□□□□ -0.7
CCDC58-201ENST00000291458 RFPL2O75678 378 aa10.68□□□□□ -0.7
CCDC58-201ENST00000291458 B3GAT3O94766 335 aa10.68□□□□□ -0.7
CCDC58-201ENST00000291458 GLUD1P00367 558 aa10.68□□□□□ -0.7
CCDC58-201ENST00000291458 F13A1P00488 732 aa10.68□□□□□ -0.7
CCDC58-201ENST00000291458 HOXB8P17481 243 aaPredicted RBP10.68□□□□□ -0.7
CCDC58-201ENST00000291458 TNFSF9P41273 254 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms