RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 HIC1Q14526 733 aa17.99■□□□□ 0.47
HIF3A-203ENST00000291300 ZNF568Q3ZCX4 644 aa17.99■□□□□ 0.47
HIF3A-203ENST00000291300 MPZL3Q6UWV2 235 aa17.99■□□□□ 0.47
HIF3A-203ENST00000291300 CDT1Q9H211 546 aa17.99■□□□□ 0.47
HIF3A-203ENST00000291300 NCANO14594 1321 aa17.98■□□□□ 0.47
HIF3A-203ENST00000291300 PASKQ96RG2 1323 aa17.98■□□□□ 0.47
HIF3A-203ENST00000291300 DNAH12Q6ZR08 3092 aa17.98■□□□□ 0.47
HIF3A-203ENST00000291300 EFCAB13Q8IY85 973 aa17.98■□□□□ 0.47
HIF3A-203ENST00000291300 HINFPQ9BQA5 517 aa17.98■□□□□ 0.47
HIF3A-203ENST00000291300 ATP8B3O60423 1300 aa17.98■□□□□ 0.47
HIF3A-203ENST00000291300 A0A0A6YYK5 440 aaPredicted RBP17.98■□□□□ 0.47
HIF3A-203ENST00000291300 BUB1BO60566 1050 aaPredicted RBP17.98■□□□□ 0.47
HIF3A-203ENST00000291300 HOXC6P09630 235 aa17.98■□□□□ 0.47
HIF3A-203ENST00000291300 TCP1P17987 556 aaKnown RBP17.98■□□□□ 0.47
HIF3A-203ENST00000291300 ACO1P21399 889 aaKnown RBP17.98■□□□□ 0.47
HIF3A-203ENST00000291300 FGFR4P22455 802 aa17.98■□□□□ 0.47
HIF3A-203ENST00000291300 SSTR3P32745 418 aaPredicted RBP17.98■□□□□ 0.47
HIF3A-203ENST00000291300 RNASE9P60153 205 aaKnown RBP17.98■□□□□ 0.47
HIF3A-203ENST00000291300 TMEM62Q0P6H9 643 aa17.98■□□□□ 0.47
HIF3A-203ENST00000291300 CRHR2Q13324 411 aa17.98■□□□□ 0.47
HIF3A-203ENST00000291300 DGKDQ16760 1214 aa17.98■□□□□ 0.47
HIF3A-203ENST00000291300 TMEM132AQ24JP5 1023 aa17.98■□□□□ 0.47
HIF3A-203ENST00000291300 MSANTD4Q8NCY6 345 aa17.98■□□□□ 0.47
HIF3A-203ENST00000291300 KAT2BQ92831 832 aa17.98■□□□□ 0.47
HIF3A-203ENST00000291300 VTI1AQ96AJ9 217 aa17.98■□□□□ 0.47
HIF3A-203ENST00000291300 ISCUQ9H1K1 167 aa17.98■□□□□ 0.47
HIF3A-203ENST00000291300 GJD2Q9UKL4 321 aa17.98■□□□□ 0.47
HIF3A-203ENST00000291300 ASAP2O43150 1006 aa17.97■□□□□ 0.47
HIF3A-203ENST00000291300 ZC3H11AO75152 810 aaKnown RBP eCLIP17.97■□□□□ 0.47
HIF3A-203ENST00000291300 CFHP08603 1231 aa17.97■□□□□ 0.47
HIF3A-203ENST00000291300 NCOA4Q13772 614 aa17.97■□□□□ 0.47
HIF3A-203ENST00000291300 HSP90AA2PQ14568 343 aaPredicted RBP17.97■□□□□ 0.47
HIF3A-203ENST00000291300 SLFN11Q7Z7L1 901 aa17.97■□□□□ 0.47
HIF3A-203ENST00000291300 FMNL3Q8IVF7 1028 aa17.97■□□□□ 0.47
HIF3A-203ENST00000291300 KIAA0319LQ8IZA0 1049 aa17.97■□□□□ 0.47
HIF3A-203ENST00000291300 ANKRD62A6NC57 917 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 SPDYE4A6NLX3 237 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 MAGEB2O15479 319 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 CXCL8P10145 99 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 VSNL1P62760 191 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 NOP14P78316 857 aaKnown RBP17.96■□□□□ 0.47
HIF3A-203ENST00000291300 WDR44Q5JSH3 913 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 LMBR1Q8WVP7 490 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 CTNNBL1Q8WYA6 563 aaPredicted RBP17.96■□□□□ 0.47
HIF3A-203ENST00000291300 RFFLQ8WZ73 363 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 PDCL3Q9H2J4 239 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 STXBP5LQ9Y2K9 1186 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 COL1A2P08123 1366 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 PHACTR2O75167 634 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 KIF4AO95239 1232 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 PHKA2P46019 1235 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 MYL6P60660 151 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 BEX3Q00994 111 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 CDR2Q01850 454 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 CKAP4Q07065 602 aaKnown RBP17.96■□□□□ 0.47
HIF3A-203ENST00000291300 GRM1Q13255 1194 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 CUL2Q13617 745 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 MTERF4Q7Z6M4 381 aaKnown RBP17.96■□□□□ 0.47
HIF3A-203ENST00000291300 NFKBIZQ9BYH8 718 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 TNFSF13BQ9Y275 285 aa17.96■□□□□ 0.47
HIF3A-203ENST00000291300 A6NJR5 290 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 ZMYND10O75800 440 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 CLTAP09496 248 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 ARF4P18085 180 aaPredicted RBP17.95■□□□□ 0.46
HIF3A-203ENST00000291300 PDE6CP51160 858 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 TFAMQ00059 246 aaKnown RBP17.95■□□□□ 0.46
HIF3A-203ENST00000291300 CC2D1AQ6P1N0 951 aaPredicted RBP17.95■□□□□ 0.46
HIF3A-203ENST00000291300 ZNF572Q7Z3I7 529 aaPredicted RBP17.95■□□□□ 0.46
HIF3A-203ENST00000291300 DAAM2Q86T65 1068 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 TLK2Q86UE8 772 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 NT5DC3Q86UY8 548 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 WDR49Q8IV35 697 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 SPATA4Q8NEY3 305 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 NLRP7Q8WX94 980 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 MAP7D2Q96T17 732 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 ARHGAP39Q9C0H5 1083 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 PDZD7Q9H5P4 517 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 CDHR5Q9HBB8 845 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 TRIP12Q14669 1992 aaPredicted RBP17.95■□□□□ 0.46
HIF3A-203ENST00000291300 RRP9O43818 475 aaKnown RBP17.95■□□□□ 0.46
HIF3A-203ENST00000291300 RTN2O75298 545 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 CLSTN1O94985 981 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 ZRANB2O95218 330 aaKnown RBP eCLIP17.95■□□□□ 0.46
HIF3A-203ENST00000291300 CPNE8Q86YQ8 564 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 MSL3Q8N5Y2 521 aaKnown RBP17.95■□□□□ 0.46
HIF3A-203ENST00000291300 HDAC7Q8WUI4 952 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 FAM49AQ9H0Q0 323 aaPredicted RBP17.95■□□□□ 0.46
HIF3A-203ENST00000291300 RBM12Q9NTZ6 932 aaKnown RBP17.95■□□□□ 0.46
HIF3A-203ENST00000291300 SLC5A4Q9NY91 659 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 RAB21Q9UL25 225 aa17.95■□□□□ 0.46
HIF3A-203ENST00000291300 BRCA2P51587 3418 aa17.94■□□□□ 0.46
HIF3A-203ENST00000291300 KCNK3O14649 394 aa17.94■□□□□ 0.46
HIF3A-203ENST00000291300 IGHA2P01877 340 aa17.94■□□□□ 0.46
HIF3A-203ENST00000291300 RPS6KA1Q15418 735 aa17.94■□□□□ 0.46
HIF3A-203ENST00000291300 KCTD19Q17RG1 926 aaPredicted RBP17.94■□□□□ 0.46
HIF3A-203ENST00000291300 KIZQ2M2Z5 673 aa17.94■□□□□ 0.46
HIF3A-203ENST00000291300 C2CD6Q53TS8 623 aa17.94■□□□□ 0.46
HIF3A-203ENST00000291300 RUFY4Q6ZNE9 571 aa17.94■□□□□ 0.46
HIF3A-203ENST00000291300 IFNLR1Q8IU57 520 aaPredicted RBP17.94■□□□□ 0.46
HIF3A-203ENST00000291300 CXCL16Q9H2A7 254 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms