RNA–Protein interactions for RNA: ENST00000290178.4

PAXBP1-201, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PAXBP1, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-201ENST00000290178 GARTP22102 1010 aa23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 GCNT1Q02742 428 aa23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 PPP1R7Q15435 360 aa23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 TRIP13Q15645 432 aaPredicted RBP23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 TDRD10Q5VZ19 366 aaKnown RBP23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 C15orf39Q6ZRI6 1047 aa23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 HOOK3Q86VS8 718 aa23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 MCPH1Q8NEM0 835 aa23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 ART4Q93070 314 aa23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 A1CFQ9NQ94 594 aaKnown RBP23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 CYP39A1Q9NYL5 469 aa23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 MTRF1LQ9UGC7 380 aaKnown RBP23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 VGLL3A8MV65 326 aa23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 SF3A3Q12874 501 aaKnown RBP eCLIP23.19■■□□□ 1.31e-7■■□□□ 11.8
PAXBP1-201ENST00000290178 XRRA1Q6P2D8 792 aa23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 USP37Q86T82 979 aa23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 SCYL3Q8IZE3 742 aa23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 PAGR1Q9BTK6 254 aa23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 CAPN7Q9Y6W3 813 aa23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 COL11A1P12107 1806 aaPredicted RBP23.19■■□□□ 1.3
PAXBP1-201ENST00000290178 MAFGO15525 162 aa23.18■■□□□ 1.3
PAXBP1-201ENST00000290178 HLA-DRAP01903 254 aa23.18■■□□□ 1.3
PAXBP1-201ENST00000290178 ATP4AP20648 1035 aa23.18■■□□□ 1.3
PAXBP1-201ENST00000290178 DSG3P32926 999 aa23.18■■□□□ 1.3
PAXBP1-201ENST00000290178 SEZ6Q53EL9 994 aa23.18■■□□□ 1.3
PAXBP1-201ENST00000290178 SGO2Q562F6 1265 aa23.18■■□□□ 1.3
PAXBP1-201ENST00000290178 FAM118BQ9BPY3 351 aa23.18■■□□□ 1.3
PAXBP1-201ENST00000290178 SELENOSQ9BQE4 189 aa23.18■■□□□ 1.3
PAXBP1-201ENST00000290178 CNOT7Q9UIV1 285 aaKnown RBP23.18■■□□□ 1.3
PAXBP1-201ENST00000290178 NFKBIEO00221 500 aa23.18■■□□□ 1.3
PAXBP1-201ENST00000290178 TP73O15350 636 aa23.18■■□□□ 1.3
PAXBP1-201ENST00000290178 ECEL1O95672 775 aa23.18■■□□□ 1.3
PAXBP1-201ENST00000290178 FNBP1Q96RU3 617 aa23.18■■□□□ 1.3
PAXBP1-201ENST00000290178 PASKQ96RG2 1323 aa23.18■■□□□ 1.3
PAXBP1-201ENST00000290178 FSCN2O14926 492 aa23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 RIPK2O43353 540 aa23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 CHN1P15882 459 aa23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 KRT17Q04695 432 aa23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 BYSLQ13895 437 aaKnown RBP23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 DDX23Q9BUQ8 820 aaKnown RBP23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 HEMGNQ9BXL5 484 aa23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 LRRC19Q9H756 370 aa23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 DNAJC17Q9NVM6 304 aaKnown RBP23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 ZNF541Q9H0D2 1346 aa23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 SRRM3A6NNA2 597 aaPredicted RBP23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 RGS16O15492 202 aaPredicted RBP23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 EXTL3O43909 919 aa23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 VNN1O95497 513 aa23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 POLGP54098 1239 aaPredicted RBP23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 EMC2Q15006 297 aa23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 CRELD2Q6UXH1 353 aaPredicted RBP23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 MICALCLQ6ZW33 695 aa23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 ASAP3Q8TDY4 903 aa23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 ADAM7Q9H2U9 754 aa23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 PICK1Q9NRD5 415 aa23.17■■□□□ 1.3
PAXBP1-201ENST00000290178 GJB6O95452 261 aa23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 C4BPAP04003 597 aaKnown RBP23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 PAEPP09466 180 aa23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 PIK3CAP42336 1068 aa23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 CCDC38Q502W7 563 aa23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 C6orf89Q6UWU4 347 aa23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 APOBEC3GQ9HC16 384 aaKnown RBP23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 PPP1R1BQ9UD71 204 aaPredicted RBP23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 PARP2Q9UGN5 583 aa23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 AGO2Q9UKV8 859 aaKnown RBP23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 EDN1P05305 212 aa23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 FDX1P10109 184 aa23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 FNTAP49354 379 aa23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 ZACNQ401N2 412 aa23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 WDR44Q5JSH3 913 aa23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 SPATS2Q86XZ4 545 aaKnown RBP23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 C12orf50Q8NA57 414 aaPredicted RBP23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 PGM2Q96G03 612 aa23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 R3HDM2Q9Y2K5 976 aaKnown RBP23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 PCDHB2Q9Y5E7 798 aa23.16■■□□□ 1.3
PAXBP1-201ENST00000290178 LRRIQ4A6NIV6 560 aa23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 SPATA31C2B4DYI2 1134 aa23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 CHKAP35790 457 aa23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 SEC16BQ96JE7 1060 aa23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 XPO6Q96QU8 1125 aaKnown RBP23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 C11orf70Q9BRQ4 267 aa23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 AAASQ9NRG9 546 aa23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 GINM1Q9NU53 330 aa23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 ANKFY1Q9P2R3 1169 aa23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 UMODL1Q5DID0 1318 aa23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 PARP14Q460N5 1801 aa23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 RARGP13631 454 aa23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 PSMD6Q15008 389 aa23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 DALRD3Q5D0E6 543 aaKnown RBP23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 ENOSF1Q7L5Y1 443 aa23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 PWWP2AQ96N64 755 aa23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 TARS2Q9BW92 718 aaKnown RBP23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 ASIC3Q9UHC3 531 aa23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 ARID2Q68CP9 1835 aa23.15■■□□□ 1.3
PAXBP1-201ENST00000290178 RGPD3A6NKT7 1758 aaPredicted RBP23.14■■□□□ 1.3
PAXBP1-201ENST00000290178 RGPD4Q7Z3J3 1758 aa23.14■■□□□ 1.3
PAXBP1-201ENST00000290178 SUPT20HL2P0C7V6 817 aa23.14■■□□□ 1.3
PAXBP1-201ENST00000290178 HARSP12081 509 aaKnown RBP23.14■■□□□ 1.3
PAXBP1-201ENST00000290178 NSFP46459 744 aaKnown RBP23.14■■□□□ 1.3
PAXBP1-201ENST00000290178 VPS41P49754 854 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms