RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 AGAP3Q96P47 875 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 MAN1A2O60476 641 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 SNX2O60749 519 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 AGGF1Q8N302 714 aaeCLIP16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 MCPH1Q8NEM0 835 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 PARD3BQ8TEW8 1205 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 KIAA1586Q9HCI6 787 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 SEL1LQ9UBV2 794 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 USP11P51784 963 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 SNRNP27Q8WVK2 155 aaKnown RBP16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 MTA3Q9BTC8 594 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 EIF2AQ9BY44 585 aaKnown RBP16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 EDEM3Q9BZQ6 932 aa16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 PSMC3IPQ9P2W1 217 aaPredicted RBP16.18■□□□□ 0.18
SHROOM4-201ENST00000289292 ECE2O60344 883 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 ITIH2P19823 946 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 ARHGDIAP52565 204 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 DNAJC3Q13217 504 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 PRDM4Q9UKN5 801 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 MYO3BQ8WXR4 1341 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 A2ML1A8K2U0 1454 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 ENO3P13929 434 aaPredicted RBP16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 PRAMEP78395 509 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 PDIA5Q14554 519 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 MYCBPAPQ8TBZ2 947 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 PGBD4Q96DM1 585 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 ERP44Q9BS26 406 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 CHD1O14646 1710 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 SKAP2O75563 359 aaPredicted RBP16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 VPS39Q96JC1 886 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 GCOM2Q9BZD3 368 aaPredicted RBP16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 THAP2Q9H0W7 228 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 APRTP07741 180 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 MAGEA4P43358 317 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 PTK7Q13308 1070 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 CATSPER4Q7RTX7 472 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 TTC8Q8TAM2 541 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 ZCWPW1Q9H0M4 648 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 TBC1D22BQ9NU19 505 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 SNX5Q9Y5X3 404 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 DFFAO00273 331 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 C21orf2O43822 256 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 ANP32DO95626 131 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 PRPF39Q86UA1 669 aaKnown RBP16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 EXOC8Q8IYI6 725 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 ANKS1AQ92625 1134 aa16.17■□□□□ 0.18
SHROOM4-201ENST00000289292 CAND2O75155 1236 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 RFX1P22670 979 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 TPCN2Q8NHX9 752 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 SASH3O75995 380 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 SCTRP47872 440 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 RGS7P49802 495 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 TOB1P50616 345 aaPredicted RBP16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 RCOR2Q8IZ40 523 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 RFWD2Q8NHY2 731 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 KCNB2Q92953 911 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 IFT43Q96FT9 208 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 SHCBP1LQ9BZQ2 653 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 HAO1Q9UJM8 370 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 ALG6Q9Y672 507 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 KLHDC7AQ5VTJ3 777 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 STAMBPL1Q96FJ0 436 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 STX18Q9P2W9 335 aaKnown RBP16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 SMG5Q9UPR3 1016 aaKnown RBP16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 PAPOLAP51003 745 aaKnown RBP16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 PSMC5P62195 406 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 CDKL3Q8IVW4 592 aaPredicted RBP16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 NEDD1Q8NHV4 660 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 ZBTB18Q99592 522 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 RANBP17Q9H2T7 1088 aaKnown RBP16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 KIF17Q9P2E2 1029 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 B2RBV5 119 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 GRAP2O75791 330 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 SLC1A1P43005 524 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 FAM96AQ9H5X1 160 aa16.16■□□□□ 0.18
SHROOM4-201ENST00000289292 SETBP1Q9Y6X0 1596 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 ADGRB3O60242 1522 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 AIM2O14862 343 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 CTCFP49711 727 aaPredicted RBP16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 NAIF1Q69YI7 327 aaPredicted RBP16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 C3orf62Q6ZUJ4 267 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 TMBIM4Q9HC24 238 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 CDH16O75309 829 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 NPR1P16066 1061 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 XPAP23025 273 aaPredicted RBP16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 COILP38432 576 aaPredicted RBP16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 STXBP2Q15833 593 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 ANXA13P27216 316 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 RFX5P48382 616 aaPredicted RBP16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 SENP7Q9BQF6 1050 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 ADNPQ9H2P0 1102 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 RAB6BQ9NRW1 208 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 SLC37A4O43826 429 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 SERPINB3P29508 390 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 STX3Q13277 289 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 PLA2G4FQ68DD2 849 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 SYDE1Q6ZW31 735 aaPredicted RBP16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 SZRD1Q7Z422 152 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 KIAA2013Q8IYS2 634 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 ABI1Q8IZP0 508 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms