RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 KANK3Q6NY19 840 aa22.35■■□□□ 1.17
RAB28-201ENST00000288723 TMEM130Q8N3G9 435 aa22.35■■□□□ 1.17
RAB28-201ENST00000288723 SLC22A17Q8WUG5 538 aa22.35■■□□□ 1.17
RAB28-201ENST00000288723 HPS3Q969F9 1004 aa22.35■■□□□ 1.17
RAB28-201ENST00000288723 MSTO1Q9BUK6 570 aa22.35■■□□□ 1.17
RAB28-201ENST00000288723 STRA6Q9BX79 667 aa22.35■■□□□ 1.17
RAB28-201ENST00000288723 CUEDC2Q9H467 287 aa22.35■■□□□ 1.17
RAB28-201ENST00000288723 CDH22Q9UJ99 828 aa22.35■■□□□ 1.17
RAB28-201ENST00000288723 USP15Q9Y4E8 981 aaPredicted RBP22.35■■□□□ 1.17
RAB28-201ENST00000288723 SF3B1O75533 1304 aaKnown RBP eCLIP22.35■■□□□ 1.172e-6■■■■■ 113
RAB28-201ENST00000288723 NCOR1O75376 2440 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 TEX28O15482 410 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 FAM189A1O60320 539 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 B3GAT3O94766 335 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 CLTAP09496 248 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 CASP1P29466 404 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 UPP1Q16831 310 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 CEP57Q86XR8 500 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 C12orf76Q8N812 135 aaPredicted RBP22.34■■□□□ 1.17
RAB28-201ENST00000288723 C3orf58Q8NDZ4 430 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 RIN2Q8WYP3 895 aaPredicted RBP22.34■■□□□ 1.17
RAB28-201ENST00000288723 TRIM9Q9C026 710 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 S1PR5Q9H228 398 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 OGTO15294 1046 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 RPL17P18621 184 aaKnown RBP22.34■■□□□ 1.17
RAB28-201ENST00000288723 ABCD1P33897 745 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 RTP2Q5QGT7 225 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 FAM171A1Q5VUB5 890 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 CD300LGQ6UXG3 332 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 GLYCTKQ8IVS8 523 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 OLFML3Q9NRN5 406 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 KCNH3Q9ULD8 1083 aa22.34■■□□□ 1.17
RAB28-201ENST00000288723 CLCN4P51793 760 aa22.33■■□□□ 1.16
RAB28-201ENST00000288723 DCLRE1AQ6PJP8 1040 aa22.33■■□□□ 1.16
RAB28-201ENST00000288723 PRSS55Q6UWB4 352 aaPredicted RBP22.33■■□□□ 1.16
RAB28-201ENST00000288723 CCDC65Q8IXS2 484 aa22.33■■□□□ 1.16
RAB28-201ENST00000288723 SLC38A7Q9NVC3 462 aa22.33■■□□□ 1.16
RAB28-201ENST00000288723 SSX2IPQ9Y2D8 614 aa22.33■■□□□ 1.16
RAB28-201ENST00000288723 I3L4J1 428 aa22.32■■□□□ 1.16
RAB28-201ENST00000288723 SSTR3P32745 418 aaPredicted RBP22.32■■□□□ 1.16
RAB28-201ENST00000288723 ASIC1P78348 528 aa22.32■■□□□ 1.16
RAB28-201ENST00000288723 ENOX2Q16206 610 aaKnown RBP22.32■■□□□ 1.16
RAB28-201ENST00000288723 ADALQ6DHV7 355 aa22.32■■□□□ 1.16
RAB28-201ENST00000288723 GLIS3Q8NEA6 775 aa22.32■■□□□ 1.16
RAB28-201ENST00000288723 FEZF2Q8TBJ5 459 aa22.32■■□□□ 1.16
RAB28-201ENST00000288723 FAM212AQ96EL1 285 aa22.32■■□□□ 1.16
RAB28-201ENST00000288723 UROC1Q96N76 676 aa22.32■■□□□ 1.16
RAB28-201ENST00000288723 LRRC27Q9C0I9 530 aa22.32■■□□□ 1.16
RAB28-201ENST00000288723 BLZF1Q9H2G9 400 aa22.32■■□□□ 1.16
RAB28-201ENST00000288723 RXFP1Q9HBX9 757 aa22.32■■□□□ 1.16
RAB28-201ENST00000288723 TUBGCP4Q9UGJ1 667 aa22.32■■□□□ 1.16
RAB28-201ENST00000288723 CITO14578 2027 aa22.32■■□□□ 1.16
RAB28-201ENST00000288723 A0A1B0GVL5 298 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 TTC26A0AVF1 554 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 LACTBL1A8MY62 500 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 WEE2P0C1S8 567 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 AFMP43652 599 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 BRCC3P46736 316 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 ACOT2P49753 483 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 AMPD3Q01432 767 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 ZP2Q05996 745 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 L1TD1Q5T7N2 865 aaKnown RBP22.31■■□□□ 1.16
RAB28-201ENST00000288723 PPFIBP1Q86W92 1011 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 GRAMD1CQ8IYS0 662 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 GJD3Q8N144 294 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 ACCSQ96QU6 501 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 TTPALQ9BTX7 342 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 GDPD2Q9HCC8 539 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 SERTAD1Q9UHV2 236 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 ATP6V1DQ9Y5K8 247 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 PODXLO00592 558 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 PRPF6O94906 941 aaKnown RBP22.31■■□□□ 1.16
RAB28-201ENST00000288723 HOXB8P17481 243 aaPredicted RBP22.31■■□□□ 1.16
RAB28-201ENST00000288723 ADSSP30520 456 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 RARS2Q5T160 578 aaKnown RBP22.31■■□□□ 1.16
RAB28-201ENST00000288723 PALB2Q86YC2 1186 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 ADHFE1Q8IWW8 467 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 KHSRPQ92945 711 aaKnown RBP eCLIP22.31■■□□□ 1.164e-7■■■□□ 18.6
RAB28-201ENST00000288723 HVCN1Q96D96 273 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 KIF12Q96FN5 646 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 RPF1Q9H9Y2 349 aaKnown RBP22.31■■□□□ 1.16
RAB28-201ENST00000288723 PLEKHA5Q9HAU0 1116 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 CPSF3Q9UKF6 684 aaKnown RBP22.31■■□□□ 1.16
RAB28-201ENST00000288723 PCDHB13Q9Y5F0 798 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 STYXL1Q9Y6J8 313 aa22.31■■□□□ 1.16
RAB28-201ENST00000288723 TMEM189-UBE2V1I3L0A0 370 aa22.3■■□□□ 1.16
RAB28-201ENST00000288723 ADH1AP07327 375 aa22.3■■□□□ 1.16
RAB28-201ENST00000288723 SPATA31D3P0C874 917 aa22.3■■□□□ 1.16
RAB28-201ENST00000288723 PFKFB1P16118 471 aa22.3■■□□□ 1.16
RAB28-201ENST00000288723 PPP2R3AQ06190 1150 aa22.3■■□□□ 1.16
RAB28-201ENST00000288723 SPATA31D4Q6ZUB0 917 aa22.3■■□□□ 1.16
RAB28-201ENST00000288723 SUSD6Q92537 303 aa22.3■■□□□ 1.16
RAB28-201ENST00000288723 DDX27Q96GQ7 796 aaKnown RBP22.3■■□□□ 1.16
RAB28-201ENST00000288723 FBXL18Q96ME1 805 aa22.3■■□□□ 1.16
RAB28-201ENST00000288723 C7orf25Q9BPX7 421 aa22.3■■□□□ 1.16
RAB28-201ENST00000288723 AGO2Q9UKV8 859 aaKnown RBP22.3■■□□□ 1.16
RAB28-201ENST00000288723 CMA1P23946 247 aa22.29■■□□□ 1.16
RAB28-201ENST00000288723 KYAT1Q16773 422 aa22.29■■□□□ 1.16
RAB28-201ENST00000288723 SLFN12LQ6IEE8 588 aa22.29■■□□□ 1.16
RAB28-201ENST00000288723 SYCP3Q8IZU3 236 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms