RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 NUGGCQ68CJ6 796 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 ASAP3Q8TDY4 903 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 MAML1Q92585 1016 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 KLHL29Q96CT2 875 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 KIF2CQ99661 725 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 HACD3Q9P035 362 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 CPA4Q9UI42 421 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 PCDHB7Q9Y5E2 793 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 SSU72P8A0A1W2PR75 194 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 NCK2O43639 380 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 HMBSP08397 361 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 MOXD1Q6UVY6 613 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 SLC30A5Q8TAD4 765 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 ACADSBP45954 432 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 TAF6P49848 677 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 CLNS1AP54105 237 aaKnown RBP19.57■□□□□ 0.72
PCDH1-201ENST00000287008 TAS2R42Q7RTR8 314 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 CDR2LQ86X02 465 aaPredicted RBP19.57■□□□□ 0.72
PCDH1-201ENST00000287008 RNF217Q8TC41 542 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 TMEM247A6NEH6 219 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 CXCL11O14625 94 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 EIF3EP60228 445 aaKnown RBP19.57■□□□□ 0.72
PCDH1-201ENST00000287008 MMS22LQ6ZRQ5 1243 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 SYT2Q8N9I0 419 aaPredicted RBP19.57■□□□□ 0.72
PCDH1-201ENST00000287008 OPTNQ96CV9 577 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 EGFL8Q99944 293 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 TUBB6Q9BUF5 446 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 TUBE1Q9UJT0 475 aa19.57■□□□□ 0.72
PCDH1-201ENST00000287008 ATP11CQ8NB49 1132 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 HPDLQ96IR7 371 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 PACSIN2Q9UNF0 486 aaPredicted RBP19.56■□□□□ 0.72
PCDH1-201ENST00000287008 GRID2IPA4D2P6 1211 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 PLSCR1O15162 318 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 DHX40Q8IX18 779 aaKnown RBP19.56■□□□□ 0.72
PCDH1-201ENST00000287008 HPS5Q9UPZ3 1129 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 P4HA2O15460 535 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 ALDH1A3P47895 512 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 COPS2P61201 443 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 PDIA2Q13087 525 aaKnown RBP19.56■□□□□ 0.72
PCDH1-201ENST00000287008 CPA5Q8WXQ8 436 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 RNPC3Q96LT9 517 aaKnown RBP19.56■□□□□ 0.72
PCDH1-201ENST00000287008 SUDS3Q9H7L9 328 aaPredicted RBP19.56■□□□□ 0.72
PCDH1-201ENST00000287008 NDFIP2Q9NV92 336 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 PLAAQ9Y263 795 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 ZC3H13Q5T200 1668 aaKnown RBP19.56■□□□□ 0.72
PCDH1-201ENST00000287008 FAM205AQ6ZU69 1335 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 GPR182O15218 404 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 B3GAT3O94766 335 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 LIG3P49916 1009 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 GALCP54803 685 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 CCNYL1Q8N7R7 359 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 C1orf54Q8WWF1 131 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 SNX19Q92543 992 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 SH3KBP1Q96B97 665 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 SPDL1Q96EA4 605 aa19.56■□□□□ 0.72
PCDH1-201ENST00000287008 RPLP2P05387 115 aaKnown RBP19.55■□□□□ 0.72
PCDH1-201ENST00000287008 ANGPTL8Q6UXH0 198 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 SENP7Q9BQF6 1050 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 COLEC11Q9BWP8 271 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 DRC3Q9H069 523 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 UNC45AQ9H3U1 944 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 KIDINS220Q9ULH0 1771 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 OGTO15294 1046 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 ESRRBO95718 433 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 WEE2P0C1S8 567 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 CLCN6P51797 869 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 DEUP1Q05D60 604 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 MAPRE1Q15691 268 aaKnown RBP19.55■□□□□ 0.72
PCDH1-201ENST00000287008 SH3BP1Q9Y3L3 701 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 C3orf70A6NLC5 250 aaPredicted RBP19.55■□□□□ 0.72
PCDH1-201ENST00000287008 ATP9BO43861 1147 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 SREBF1P36956 1147 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 BFSP2Q13515 415 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 CLEC17AQ6ZS10 378 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 SPATC1LQ9H0A9 340 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 VPS33BQ9H267 617 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 A0A1B0GTH6 734 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 CFLARO15519 480 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 SUPT20HL2P0C7V6 817 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 GNL1P36915 607 aaPredicted RBP19.55■□□□□ 0.72
PCDH1-201ENST00000287008 SLC26A2P50443 739 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 CLCN3P51790 818 aa19.55■□□□□ 0.72
PCDH1-201ENST00000287008 DDX53Q86TM3 631 aaKnown RBP19.55■□□□□ 0.72
PCDH1-201ENST00000287008 FBXO16Q8IX29 292 aaPredicted RBP19.55■□□□□ 0.72
PCDH1-201ENST00000287008 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.55■□□□□ 0.72
PCDH1-201ENST00000287008 KIF3CO14782 793 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 HERVK_113P62684 666 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 FMR1Q06787 632 aaKnown RBP eCLIP19.54■□□□□ 0.72
PCDH1-201ENST00000287008 CCDC144BQ3MJ40 725 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 GMCL1P1Q8NEA9 526 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 RAPGEF5Q92565 580 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 ZNF197O14709 1029 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 DNAJC6O75061 913 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 ESRRAP11474 423 aaPredicted RBP19.54■□□□□ 0.72
PCDH1-201ENST00000287008 IFNA8P32881 189 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 PIGHQ14442 188 aaPredicted RBP19.54■□□□□ 0.72
PCDH1-201ENST00000287008 KIF19Q2TAC6 998 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 THEMIS2Q5TEJ8 643 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 IZUMO3Q5VZ72 239 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 ZBED8Q8IZ13 594 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms