RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 RTN4Q9NQC3 1192 aaKnown RBP23.63■■□□□ 1.37
PDLIM3-203ENST00000284771 OFD1O75665 1012 aa23.62■■□□□ 1.37
PDLIM3-203ENST00000284771 UBASH3AP57075 661 aa23.62■■□□□ 1.37
PDLIM3-203ENST00000284771 DEFB103AP81534 67 aa23.62■■□□□ 1.37
PDLIM3-203ENST00000284771 ZBTB6Q15916 424 aa23.62■■□□□ 1.37
PDLIM3-203ENST00000284771 CLLU1OSQ5K130 101 aa23.62■■□□□ 1.37
PDLIM3-203ENST00000284771 C15orf39Q6ZRI6 1047 aa23.62■■□□□ 1.37
PDLIM3-203ENST00000284771 ANKRD20A12PQ8NF67 263 aa23.62■■□□□ 1.37
PDLIM3-203ENST00000284771 XPO4Q9C0E2 1151 aaKnown RBP23.62■■□□□ 1.37
PDLIM3-203ENST00000284771 TMEM117Q9H0C3 514 aa23.62■■□□□ 1.37
PDLIM3-203ENST00000284771 PDCD11Q14690 1871 aaKnown RBP23.62■■□□□ 1.37
PDLIM3-203ENST00000284771 FGBP02675 491 aa23.61■■□□□ 1.37
PDLIM3-203ENST00000284771 C4BPAP04003 597 aaKnown RBP23.61■■□□□ 1.37
PDLIM3-203ENST00000284771 FMO5P49326 533 aa23.61■■□□□ 1.37
PDLIM3-203ENST00000284771 WDR5P61964 334 aaKnown RBP23.61■■□□□ 1.37
PDLIM3-203ENST00000284771 SV2AQ7L0J3 742 aa23.61■■□□□ 1.37
PDLIM3-203ENST00000284771 TMCO2Q7Z6W1 182 aaPredicted RBP23.61■■□□□ 1.37
PDLIM3-203ENST00000284771 WDR49Q8IV35 697 aa23.61■■□□□ 1.37
PDLIM3-203ENST00000284771 CD302Q8IX05 232 aa23.61■■□□□ 1.37
PDLIM3-203ENST00000284771 HACE1Q8IYU2 909 aa23.61■■□□□ 1.37
PDLIM3-203ENST00000284771 PCDHB7Q9Y5E2 793 aa23.61■■□□□ 1.37
PDLIM3-203ENST00000284771 TNRC18O15417 2968 aaPredicted RBP23.61■■□□□ 1.37
PDLIM3-203ENST00000284771 LRRN2O75325 713 aa23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 AFPP02771 609 aaKnown RBP23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 KCNE1P15382 129 aa23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 SURF1Q15526 300 aa23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 NAB2Q15742 525 aa23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 MTMR12Q9C0I1 747 aa23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 CXXC1Q9P0U4 656 aaPredicted RBP23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 C2CD2Q9Y426 696 aa23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 NR2E3Q9Y5X4 410 aa23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 PTPRSQ13332 1948 aa23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 LGALS16A8MUM7 142 aa23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 GATMP50440 423 aa23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 TFAMQ00059 246 aaKnown RBP23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 TDRD10Q5VZ19 366 aaKnown RBP23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 USP37Q86T82 979 aa23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 HELQQ8TDG4 1101 aa23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 TOP1MTQ969P6 601 aa23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 C18orf25Q96B23 403 aaPredicted RBP23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 KIF12Q96FN5 646 aa23.6■■□□□ 1.37
PDLIM3-203ENST00000284771 PES1O00541 588 aaKnown RBP23.59■■□□□ 1.37
PDLIM3-203ENST00000284771 INPPL1O15357 1258 aa23.59■■□□□ 1.37
PDLIM3-203ENST00000284771 BAIAP3O94812 1187 aa23.59■■□□□ 1.37
PDLIM3-203ENST00000284771 UPP2O95045 317 aa23.59■■□□□ 1.37
PDLIM3-203ENST00000284771 MRE11P49959 708 aa23.59■■□□□ 1.37
PDLIM3-203ENST00000284771 SCNN1GP51170 649 aa23.59■■□□□ 1.37
PDLIM3-203ENST00000284771 GUCY2FP51841 1108 aa23.59■■□□□ 1.37
PDLIM3-203ENST00000284771 SOX4Q06945 474 aaPredicted RBP23.59■■□□□ 1.37
PDLIM3-203ENST00000284771 TMEM132DQ14C87 1099 aa23.59■■□□□ 1.37
PDLIM3-203ENST00000284771 CXorf38Q8TB03 319 aa23.59■■□□□ 1.37
PDLIM3-203ENST00000284771 PPP1R10Q96QC0 940 aaKnown RBP23.59■■□□□ 1.37
PDLIM3-203ENST00000284771 LBHD1Q9BQE6 289 aaPredicted RBP23.59■■□□□ 1.37
PDLIM3-203ENST00000284771 TRIM5Q9C035 493 aa23.59■■□□□ 1.37
PDLIM3-203ENST00000284771 UBN1Q9NPG3 1134 aa23.59■■□□□ 1.37
PDLIM3-203ENST00000284771 CST3P01034 146 aaPredicted RBP23.58■■□□□ 1.37
PDLIM3-203ENST00000284771 POMCP01189 267 aa23.58■■□□□ 1.37
PDLIM3-203ENST00000284771 ACTN1P12814 892 aa23.58■■□□□ 1.37
PDLIM3-203ENST00000284771 GTF2H1P32780 548 aa23.58■■□□□ 1.37
PDLIM3-203ENST00000284771 KCNMA1Q12791 1236 aa23.58■■□□□ 1.37
PDLIM3-203ENST00000284771 DUOXA2Q1HG44 320 aa23.58■■□□□ 1.37
PDLIM3-203ENST00000284771 ZACNQ401N2 412 aa23.58■■□□□ 1.37
PDLIM3-203ENST00000284771 NPAS4Q8IUM7 802 aa23.58■■□□□ 1.37
PDLIM3-203ENST00000284771 TMEM8AQ9HCN3 771 aa23.58■■□□□ 1.37
PDLIM3-203ENST00000284771 TUBGCP4Q9UGJ1 667 aa23.58■■□□□ 1.37
PDLIM3-203ENST00000284771 EFCAB14O75071 495 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 VNN1O95497 513 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 MAGEA10P43363 369 aaPredicted RBP23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 UBXN1Q04323 297 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 KRT39Q6A163 491 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 PSRC1Q6PGN9 363 aaPredicted RBP23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 TRAPPC11Q7Z392 1133 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 C1orf127Q8N9H9 656 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 TAS1R2Q8TE23 839 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 CASD1Q96PB1 797 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 CRACR2AQ9BSW2 395 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 LRFN2Q9ULH4 789 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 INPP5FQ9Y2H2 1132 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 DERAQ9Y315 318 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 TDRD15B5MCY1 1934 aaKnown RBP23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 FNDC1Q4ZHG4 1894 aaPredicted RBP23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 RGS19P49795 217 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 MXI1P50539 228 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 FILIP1LQ4L180 1135 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 NT5DC4Q86YG4 428 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 LMO3Q8TAP4 145 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 SEMA4DQ92854 862 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 GOLGA2P5Q9HBQ8 144 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 SIX4Q9UIU6 781 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 COQ4Q9Y3A0 265 aa23.57■■□□□ 1.36
PDLIM3-203ENST00000284771 COL4A6Q14031 1691 aa23.56■■□□□ 1.36
PDLIM3-203ENST00000284771 PMM2O15305 246 aa23.56■■□□□ 1.36
PDLIM3-203ENST00000284771 THP07101 528 aa23.56■■□□□ 1.36
PDLIM3-203ENST00000284771 TMEM191BP0C7N4 346 aa23.56■■□□□ 1.36
PDLIM3-203ENST00000284771 PBX1P40424 430 aa23.56■■□□□ 1.36
PDLIM3-203ENST00000284771 GLB1LQ6UWU2 654 aa23.56■■□□□ 1.36
PDLIM3-203ENST00000284771 HERVK_113Q902F9 699 aa23.56■■□□□ 1.36
PDLIM3-203ENST00000284771 ELMO3Q96BJ8 720 aa23.56■■□□□ 1.36
PDLIM3-203ENST00000284771 RPS6KC1Q96S38 1066 aa23.56■■□□□ 1.36
PDLIM3-203ENST00000284771 CACNG4Q9UBN1 327 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms