RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 CMTR1Q8N1G2 835 aaKnown RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 TTC30BQ8N4P2 665 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 SPATA17Q96L03 361 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 DSEQ9UL01 958 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 H7C0S8 307 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 DFFAO00273 331 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 PER1O15534 1290 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 DIAPH2O60879 1101 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 NDUFS3O75489 264 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 SERPINI2O75830 405 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 EIF2S1P05198 315 aaKnown RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 PRKCBP05771 671 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 SLC9A1P19634 815 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 MUTP22033 750 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 CDC27P30260 824 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 GRIK1P39086 918 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 GCLMP48507 274 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 PCYT1AP49585 367 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 TWF1Q12792 350 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 SPP2Q13103 211 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 DMC1Q14565 340 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 HIF1AQ16665 826 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 KNOP1Q1ED39 458 aaKnown RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 SV2CQ496J9 727 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 NUGGCQ68CJ6 796 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 GRAMD4Q6IC98 578 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 NOTUMQ6P988 496 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 FAM47EQ6ZV65 393 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 NLRP9Q7RTR0 991 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 SLC35F6Q8N357 371 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 UHMK1Q8TAS1 419 aaKnown RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 PPP1R16BQ96T49 567 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 TMEM245Q9H330 911 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 SEC31BQ9NQW1 1179 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 ARHGEF38Q9NXL2 777 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 ERAP1Q9NZ08 941 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 TBK1Q9UHD2 729 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 PCDHA13Q9Y5I0 950 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 IGSF9BQ9UPX0 1349 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 FTCDO95954 541 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 LRG1P02750 347 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 RAB27AP51159 221 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 LRRC41Q15345 812 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 RBBP7Q16576 425 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 KBTBD12Q3ZCT8 623 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 C16orf62Q7Z3J2 963 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 ELOA2Q8IYF1 753 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 MMGT1Q8N4V1 131 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 PCYOX1LQ8NBM8 494 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 ARRDC4Q8NCT1 418 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 RASGRP4Q8TDF6 673 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 GRAMD1AQ96CP6 724 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 DYNLL2Q96FJ2 89 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 HES6Q96HZ4 224 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 TMEM47Q9BQJ4 181 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 ZCCHC2Q9C0B9 1178 aaKnown RBP4.28□□□□□ -1.72
SCN3A-201ENST00000283254 SIK2Q9H0K1 926 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 VPS33BQ9H267 617 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 TRPC7Q9HCX4 862 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 TMEM161AQ9NX61 479 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 KIF1BO60333 1816 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 HECW2Q9P2P5 1572 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 AFF2P51816 1311 aa4.28□□□□□ -1.72
SCN3A-201ENST00000283254 FAM187AA6NFU0 413 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 PSMD14O00487 310 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 IFNA14P01570 189 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 CHGBP05060 677 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 PAX3P23760 479 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 LTKP29376 864 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 TRPC1P48995 793 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 AP2B1P63010 937 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 PDIA5Q14554 519 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 PTPAQ15257 358 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 SGSM1Q2NKQ1 1148 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 NUDCD3Q8IVD9 361 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF555Q8NEP9 628 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 TTLL11Q8NHH1 800 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 STAMBPL1Q96FJ0 436 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 FAR2Q96K12 515 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 ZFYVE19Q96K21 471 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 XPO6Q96QU8 1125 aaKnown RBP4.28□□□□□ -1.73
SCN3A-201ENST00000283254 NUDT12Q9BQG2 462 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 MRPS26Q9BYN8 205 aaKnown RBP4.28□□□□□ -1.73
SCN3A-201ENST00000283254 ENOPH1Q9UHY7 261 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 PKP3Q9Y446 797 aa4.28□□□□□ -1.73
SCN3A-201ENST00000283254 SLC16A4O15374 487 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 GADD45BO75293 160 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-201ENST00000283254 TADA2AO75478 443 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 WDR47O94967 919 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 PRR29P0C7W0 189 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 ODC1P11926 461 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 KPNA1P52294 538 aaPredicted RBP4.27□□□□□ -1.73
SCN3A-201ENST00000283254 BLVRAP53004 296 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 OXCT1P55809 520 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 DEFA1P59665 94 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 DEFA3P59666 94 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 RPL10AP62906 217 aaKnown RBP4.27□□□□□ -1.73
SCN3A-201ENST00000283254 BFSP2Q13515 415 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 EDRF1Q3B7T1 1238 aa4.27□□□□□ -1.73
SCN3A-201ENST00000283254 DSG4Q86SJ6 1040 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms