RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 PCDHGA8Q9Y5G5 932 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 PCDHGA7Q9Y5G6 932 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 PCDHGA6Q9Y5G7 932 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 PCDHGA3Q9Y5H0 932 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 PCDHGA2Q9Y5H1 932 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 PCDHA2Q9Y5H9 948 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 MRFAP1Q9Y605 127 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 IRAK3Q9Y616 596 aa5.2□□□□□ -1.58
CD44-202ENST00000278385 CPSF1Q10570 1443 aaKnown RBP5.2□□□□□ -1.58
CD44-202ENST00000278385 TBX1O43435 398 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 ULK1O75385 1050 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 OFD1O75665 1012 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 DGKIO75912 1065 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 TSPAN15O95858 294 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 C8AP07357 584 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 DBHP09172 617 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 VIPR1P32241 457 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 KRT9P35527 623 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 YBX1P67809 324 aaKnown RBP5.19□□□□□ -1.58
CD44-202ENST00000278385 DLG4P78352 724 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 ZNF267Q14586 743 aaPredicted RBP5.19□□□□□ -1.58
CD44-202ENST00000278385 KIR3DS1Q14943 382 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 PSMD6Q15008 389 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 SART3Q15020 963 aaKnown RBP5.19□□□□□ -1.58
CD44-202ENST00000278385 LLGL1Q15334 1064 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 PRSS53Q2L4Q9 553 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 TTC31Q49AM3 519 aaPredicted RBP5.19□□□□□ -1.58
CD44-202ENST00000278385 CCDC38Q502W7 563 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 ZNF385BQ569K4 471 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 CIAPIN1Q6FI81 312 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 TMCO3Q6UWJ1 677 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 RSPO2Q6UXX9 243 aaPredicted RBP5.19□□□□□ -1.58
CD44-202ENST00000278385 RPTNQ6XPR3 784 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 CCDC149Q6ZUS6 474 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 TOM1L2Q6ZVM7 507 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 NEK10Q6ZWH5 1172 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.19□□□□□ -1.58
CD44-202ENST00000278385 C7orf31Q8N865 590 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 ZBTB34Q8NCN2 500 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 SMC1BQ8NDV3 1235 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 CENPIQ92674 756 aaPredicted RBP5.19□□□□□ -1.58
CD44-202ENST00000278385 ALG3Q92685 438 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 FERMT2Q96AC1 680 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 TRIM44Q96DX7 344 aaPredicted RBP5.19□□□□□ -1.58
CD44-202ENST00000278385 WNK4Q96J92 1243 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 MCOLN1Q9GZU1 580 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 ABCG4Q9H172 646 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 GPR27Q9NS67 375 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 ATP8A2Q9NTI2 1148 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 ARGLU1Q9NWB6 273 aaPredicted RBP5.19□□□□□ -1.58
CD44-202ENST00000278385 MKS1Q9NXB0 559 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 CLDND1Q9NY35 253 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 KLHL14Q9P2G3 628 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 IFT80Q9P2H3 777 aaPredicted RBP5.19□□□□□ -1.58
CD44-202ENST00000278385 EPS15L1Q9UBC2 864 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 STAP2Q9UGK3 403 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 XPO7Q9UIA9 1087 aaKnown RBP5.19□□□□□ -1.58
CD44-202ENST00000278385 PA2G4Q9UQ80 394 aaKnown RBP5.19□□□□□ -1.58
CD44-202ENST00000278385 POLHQ9Y253 713 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 PCDHGB6Q9Y5F9 930 aa5.19□□□□□ -1.58
CD44-202ENST00000278385 NINLQ9Y2I6 1382 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 TRPM3Q9HCF6 1732 aaPredicted RBP5.18□□□□□ -1.58
CD44-202ENST00000278385 GLI3P10071 1580 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 A0A087WV62 115 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 TCRBV16S1A1N1A0A5B0 115 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 ZC3H12DA2A288 527 aaKnown RBP5.18□□□□□ -1.58
CD44-202ENST00000278385 ZNF891A8MT65 544 aaPredicted RBP5.18□□□□□ -1.58
CD44-202ENST00000278385 B4E1Z4 1266 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 H7BY64 318 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 MASP2O00187 686 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 ETV2O00321 342 aaPredicted RBP5.18□□□□□ -1.58
CD44-202ENST00000278385 KRIT1O00522 736 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 AQP7O14520 342 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 FRS3O43559 492 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 NTRK1P04629 796 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 CAPNS1P04632 268 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 MSL3P1P0C860 447 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 DHRS4L1P0CG22 281 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 MYBP10242 640 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 IL2P60568 153 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 MESP2Q0VG99 397 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 PPP2R5CQ13362 524 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 PKN2Q16513 984 aaKnown RBP5.18□□□□□ -1.58
CD44-202ENST00000278385 ATAT1Q5SQI0 421 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 HECTD3Q5T447 861 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 PIK3R6Q5UE93 754 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 RTL10Q7L3V2 364 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 DEFB132Q7Z7B7 95 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 DAAM2Q86T65 1068 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 PTRH1Q86Y79 214 aaKnown RBP5.18□□□□□ -1.58
CD44-202ENST00000278385 ERC1Q8IUD2 1116 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 EGFL6Q8IUX8 553 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 TMEM151BQ8IW70 566 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 PCYOX1LQ8NBM8 494 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 OR8H1Q8NGG4 311 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 SNX21Q969T3 373 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 HIC2Q96JB3 615 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 ACO2Q99798 780 aaKnown RBP5.18□□□□□ -1.58
CD44-202ENST00000278385 ZFYVE21Q9BQ24 234 aa5.18□□□□□ -1.58
CD44-202ENST00000278385 GOLGA2P5Q9HBQ8 144 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms