RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 DDB1Q16531 1140 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 TMEM266Q2M3C6 531 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 TDRD12Q587J7 1177 aaKnown RBP3.17□□□□□ -1.9
HERC4-201ENST00000277817 THSD4Q6ZMP0 1018 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 RSRC2Q7L4I2 434 aaKnown RBP3.17□□□□□ -1.9
HERC4-201ENST00000277817 HEATR3Q7Z4Q2 680 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 TXLNBQ8N3L3 684 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 ARL6IP6Q8N6S5 226 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 CCDC191Q8NCU4 936 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 FAM13CQ8NE31 585 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 DLG3Q92796 817 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 USP7Q93009 1102 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 CALML4Q96GE6 196 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 TRIM47Q96LD4 638 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 CCDC140Q96MF4 163 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 KRTAP3-3Q9BYR6 98 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 KRTAP3-2Q9BYR7 98 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 ZDHHC5Q9C0B5 715 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 MYLK2Q9H1R3 596 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 VPS33BQ9H267 617 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 ARMT1Q9H993 441 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 LZTFL1Q9NQ48 299 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 MCM9Q9NXL9 1143 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 BTG4Q9NY30 223 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 SAMD15Q9P1V8 674 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 TJP2Q9UDY2 1190 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 FAM205CA6NFA0 338 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 AGAP14A8MT82 685 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 CHURC1-FNTBB4DL54 471 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 E7EWF7 191 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 ZNF561-AS1K7EIQ3 104 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 MYO1BO43795 1136 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 AHCYL1O43865 530 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 H2AFYO75367 372 aaKnown RBP3.17□□□□□ -1.9
HERC4-201ENST00000277817 ITGA5P08648 1049 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 GYS1P13807 737 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 ATP5JP18859 108 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 TRIM21P19474 475 aaKnown RBP3.17□□□□□ -1.9
HERC4-201ENST00000277817 TGM1P22735 817 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 TM4SF1P30408 202 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 HOXC12P31275 282 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 MCM7P33993 719 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 STAT6P42226 847 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 PRELPP51888 382 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 CCINQ13939 588 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 PDE1CQ14123 709 aaPredicted RBP3.17□□□□□ -1.9
HERC4-201ENST00000277817 SLC9A5Q14940 896 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 ZNF174Q15697 407 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 FLYWCH1Q4VC44 716 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 TMEM177Q53S58 311 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 TCERG1LQ5VWI1 586 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 TAX1BP1Q86VP1 789 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 DNAJC10Q8IXB1 793 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 CCDC24Q8N4L8 307 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 MEIOBQ8N635 442 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 AGBL5Q8NDL9 886 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 SLC5A5Q92911 643 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 TSG101Q99816 390 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 B3GNT5Q9BYG0 378 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 TM6SF1Q9BZW5 370 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 CLSTN2Q9H4D0 955 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 MYO6Q9UM54 1294 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 MTMR6Q9Y217 621 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 SIPA1L1O43166 1804 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 AKR1B10O60218 316 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 ZNF202O95125 648 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 SLU7O95391 586 aaKnown RBP3.17□□□□□ -1.9
HERC4-201ENST00000277817 TBX18O95935 607 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 MT-CO1P00395 513 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 CSTBP04080 98 aaKnown RBP3.17□□□□□ -1.9
HERC4-201ENST00000277817 TIMP2P16035 220 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 KCNA3P22001 575 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 STAT1P42224 750 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 PAFAH1B1P43034 410 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 LSM11P83369 360 aaKnown RBP eCLIP3.17□□□□□ -1.9
HERC4-201ENST00000277817 KARSQ15046 597 aaKnown RBP3.17□□□□□ -1.9
HERC4-201ENST00000277817 MPEG1Q2M385 716 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 JMJD6Q6NYC1 403 aaPredicted RBP3.17□□□□□ -1.9
HERC4-201ENST00000277817 TTLL7Q6ZT98 887 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 OTUD6BQ8N6M0 293 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 PCDH19Q8TAB3 1148 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 STON2Q8WXE9 905 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 LLPHQ9BRT6 129 aaKnown RBP3.17□□□□□ -1.9
HERC4-201ENST00000277817 EMILIN2Q9BXX0 1053 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 LSG1Q9H089 658 aaKnown RBP3.17□□□□□ -1.9
HERC4-201ENST00000277817 GBP3Q9H0R5 595 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 PGPEP1Q9NXJ5 209 aa3.17□□□□□ -1.9
HERC4-201ENST00000277817 XPO7Q9UIA9 1087 aaKnown RBP3.17□□□□□ -1.9
HERC4-201ENST00000277817 NSFL1CQ9UNZ2 370 aaKnown RBP3.17□□□□□ -1.9
HERC4-201ENST00000277817 FSD2A1L4K1 749 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 KRBA1A5PL33 1030 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 KLHL33A6NCF5 533 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 VWA3AA6NCI4 1184 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 GOLGA6L9A6NEM1 432 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 MEN1O00255 615 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 PPEF1O14829 653 aaPredicted RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 POLR2DO15514 142 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 SASH3O75995 380 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 FGFR1OPO95684 399 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 PSAPP07602 524 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms