RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 CHMP6Q96FZ7 201 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 SNF8Q96H20 258 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 SP110Q9HB58 689 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 GPBP1L1Q9HC44 474 aaPredicted RBP11.92□□□□□ -0.5
USP6NL-201ENST00000277575 VCX3AQ9NNX9 186 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 IL17RBQ9NRM6 502 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 ABCF3Q9NUQ8 709 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 KLHL11Q9NVR0 708 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 TRIM10Q9UDY6 481 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 NEURL4Q96JN8 1562 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 KDM4FA0A1W2PPD8 638 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 ZNF185O15231 689 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 HSPA4LO95757 839 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 RALAP11233 206 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 ITGA4P13612 1032 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 GRIK1P39086 918 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 KLK7P49862 253 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 EIF3EP60228 445 aaKnown RBP11.92□□□□□ -0.5
USP6NL-201ENST00000277575 FAM47EQ6ZV65 393 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 CRLF3Q8IUI8 442 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 ATP11CQ8NB49 1132 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 SENP7Q9BQF6 1050 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 PDCD2LQ9BRP1 358 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 FAM49BQ9NUQ9 324 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 TADA3O75528 432 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 CHEK2O96017 543 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 PGK2P07205 417 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 BRAFP15056 766 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 CYP2C19P33261 490 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 EPHX2P34913 555 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 SATB1Q01826 763 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 KRT17Q04695 432 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 SPDYE1Q8NFV5 336 aaPredicted RBP11.92□□□□□ -0.5
USP6NL-201ENST00000277575 OR6P1Q8NGX9 317 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 LRRC1Q9BTT6 524 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 TMEM117Q9H0C3 514 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 PIDD1Q9HB75 910 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 MROH2AA6NES4 1674 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 A0A087WUV0 522 aaPredicted RBP11.92□□□□□ -0.5
USP6NL-201ENST00000277575 A0A1W2PQJ5 194 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 SAMD3Q8N6K7 520 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 GLT1D1Q96MS3 346 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 MROH8Q9H579 483 aa11.92□□□□□ -0.5
USP6NL-201ENST00000277575 APOL1O14791 398 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 DDNO94850 711 aaPredicted RBP11.91□□□□□ -0.5
USP6NL-201ENST00000277575 ESRRAP11474 423 aaPredicted RBP11.91□□□□□ -0.5
USP6NL-201ENST00000277575 TAC1P20366 129 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 SLC8A1P32418 973 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 OCRLQ01968 901 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 EPC2Q52LR7 807 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 DACT2Q5SW24 774 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 TRIM68Q6AZZ1 485 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 EPM2AIP1Q7L775 607 aaPredicted RBP11.91□□□□□ -0.5
USP6NL-201ENST00000277575 TRAPPC11Q7Z392 1133 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 SYTL5Q8TDW5 730 aaPredicted RBP11.91□□□□□ -0.5
USP6NL-201ENST00000277575 SDCCAG3Q96C92 435 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 MS4A14Q96JA4 679 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 DDX4Q9NQI0 724 aaKnown RBP11.91□□□□□ -0.5
USP6NL-201ENST00000277575 SLC38A7Q9NVC3 462 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 FBXL5Q9UKA1 691 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 WNT10BO00744 389 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 GCLCP48506 637 aaPredicted RBP11.91□□□□□ -0.5
USP6NL-201ENST00000277575 VSNL1P62760 191 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 RCOR2Q8IZ40 523 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 PPWD1Q96BP3 646 aaKnown RBP11.91□□□□□ -0.5
USP6NL-201ENST00000277575 THOC1Q96FV9 657 aaKnown RBP11.91□□□□□ -0.5
USP6NL-201ENST00000277575 MCEEQ96PE7 176 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 MED15Q96RN5 788 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 TRIM55Q9BYV6 548 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 TJP2Q9UDY2 1190 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 PLAGL2Q9UPG8 496 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.91□□□□□ -0.5
USP6NL-201ENST00000277575 A0A0G2JND7 137 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 NEMP1O14524 444 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 PPP1R12AO14974 1030 aaPredicted RBP11.91□□□□□ -0.5
USP6NL-201ENST00000277575 MUTP22033 750 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 PCSK1P29120 753 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 TPI1P60174 286 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 PRAMEP78395 509 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 NOTUMQ6P988 496 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 FBXL16Q8N461 479 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 COG1Q8WTW3 980 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 TUBB6Q9BUF5 446 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 MLXIPLQ9NP71 852 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 TXLNGQ9NUQ3 528 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 EPS15L1Q9UBC2 864 aa11.91□□□□□ -0.5
USP6NL-201ENST00000277575 OGTO15294 1046 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 GRAP2O75791 330 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 UPP2O95045 317 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 TMEM253P0C7T8 217 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 KLRC1P26715 233 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 CPT1AP50416 773 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 PIGHQ14442 188 aaPredicted RBP11.9□□□□□ -0.5
USP6NL-201ENST00000277575 APOBEC3HQ6NTF7 200 aaKnown RBP11.9□□□□□ -0.5
USP6NL-201ENST00000277575 GPAT2Q6NUI2 795 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 VGLL2Q8N8G2 317 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 HPDLQ96IR7 371 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 RRP15Q9Y3B9 282 aaKnown RBP11.9□□□□□ -0.5
USP6NL-201ENST00000277575 PLSCR1O15162 318 aa11.9□□□□□ -0.5
USP6NL-201ENST00000277575 MAPK13O15264 365 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms