RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 CEP89Q96ST8 783 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 TRIM51Q9BSJ1 452 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 STMN4Q9H169 189 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-201ENST00000277198 KCNH7Q9NS40 1196 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 TBC1D22BQ9NU19 505 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 FLRT1Q9NZU1 646 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 BCCIPQ9P287 314 aaKnown RBP eCLIP13.85□□□□□ -0.19
C9orf3-201ENST00000277198 UVRAGQ9P2Y5 699 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 ADAMTS5Q9UNA0 930 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 LRRN2O75325 713 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 ICAM1P05362 532 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 ITGB5P18084 799 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 QARSP47897 775 aaKnown RBP13.84□□□□□ -0.19
C9orf3-201ENST00000277198 RARRES1P49788 294 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 MXI1P50539 228 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 MFAP3P55082 362 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 ACTN3Q08043 901 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-201ENST00000277198 PPP3CAQ08209 521 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 SWT1Q5T5J6 900 aaKnown RBP13.84□□□□□ -0.19
C9orf3-201ENST00000277198 C6orf118Q5T5N4 469 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 DENND2CQ68D51 928 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 CYFIP1Q7L576 1253 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 RPUSD2Q8IZ73 545 aaKnown RBP13.84□□□□□ -0.19
C9orf3-201ENST00000277198 BANK1Q8NDB2 785 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 KAT2BQ92831 832 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 HVCN1Q96D96 273 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 PLVAPQ9BX97 442 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 RNF208Q9H0X6 261 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 HSPBP1Q9NZL4 362 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 EXOC7Q9UPT5 735 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 CAPN7Q9Y6W3 813 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 COL11A1P12107 1806 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-201ENST00000277198 PDE4DIPQ5VU43 2346 aa13.84□□□□□ -0.19
C9orf3-201ENST00000277198 DHX15O43143 795 aaKnown RBP13.83□□□□□ -0.19
C9orf3-201ENST00000277198 CYP1A2P05177 515 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 ALAS1P13196 640 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 DLG4P78352 724 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 ADCY2Q08462 1091 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 C1orf220Q5T0J3 134 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 ZDHHC24Q6UX98 284 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 SLC30A10Q6XR72 485 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 NCAPG2Q86XI2 1143 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 C4orf19Q8IY42 314 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 PRELID2Q8N945 189 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 RDH13Q8NBN7 331 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 NPLOC4Q8TAT6 608 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 EPS8L1Q8TE68 723 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 PXYLP1Q8TE99 480 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 SLC20A1Q8WUM9 679 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 RAPGEF5Q92565 580 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 CD101Q93033 1021 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 TMEM106CQ9BVX2 250 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 EPB41L4BQ9H329 900 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 ERVK-5Q9HDB9 667 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 NOCTQ9UK39 431 aaKnown RBP13.83□□□□□ -0.19
C9orf3-201ENST00000277198 GTF3C4Q9UKN8 822 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 PNMA2Q9UL42 364 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 ZNF214Q9UL59 606 aaPredicted RBP13.83□□□□□ -0.19
C9orf3-201ENST00000277198 COQ4Q9Y3A0 265 aa13.83□□□□□ -0.19
C9orf3-201ENST00000277198 RBBP6Q7Z6E9 1792 aaKnown RBP13.83□□□□□ -0.2
C9orf3-201ENST00000277198 H0YHG0 523 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 HNRNPH1P31943 449 aaKnown RBP13.83□□□□□ -0.2
C9orf3-201ENST00000277198 GTF2H1P32780 548 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 NCKAP1LP55160 1127 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 UBXN2AP68543 259 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 CCNA1P78396 465 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 ERMARDQ5T6L9 678 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 GKAP1Q5VSY0 366 aaPredicted RBP13.83□□□□□ -0.2
C9orf3-201ENST00000277198 PCNX4Q63HM2 1172 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 CCDC121Q6ZUS5 278 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 HAUS6Q7Z4H7 955 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 USP37Q86T82 979 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 ARHGEF19Q8IW93 802 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 C12orf50Q8NA57 414 aaPredicted RBP13.83□□□□□ -0.2
C9orf3-201ENST00000277198 SOCS4Q8WXH5 440 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 SHC3Q92529 594 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 GLG1Q92896 1179 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 SLCO2A1Q92959 643 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 TATDN2Q93075 761 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 CABS1Q96KC9 395 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 FAM81BQ96LP2 452 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 GRHL1Q9NZI5 618 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 CNOT8Q9UFF9 292 aaKnown RBP13.83□□□□□ -0.2
C9orf3-201ENST00000277198 DDX20Q9UHI6 824 aaKnown RBP13.83□□□□□ -0.2
C9orf3-201ENST00000277198 RIPK3Q9Y572 518 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 PCDHA3Q9Y5H8 950 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 UBIAD1Q9Y5Z9 338 aa13.83□□□□□ -0.2
C9orf3-201ENST00000277198 GOLGA6L7A0A1B0GV03 622 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 AGTP01019 485 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 RARGP13631 454 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 COMTP21964 271 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 MMP13P45452 471 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 GCLMP48507 274 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 SMTNP53814 917 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 PLTPP55058 493 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 IFT88Q13099 833 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 MAP2K5Q13163 448 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 ZNF211Q13398 564 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-201ENST00000277198 GRB14Q14449 540 aa13.82□□□□□ -0.2
C9orf3-201ENST00000277198 CACNA2D3Q8IZS8 1091 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms