RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 TOMM20Q15388 145 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 MAPK11Q15759 364 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 USF2Q15853 346 aaPredicted RBP16.55■□□□□ 0.24
UBR3-201ENST00000272793 PGBD4Q96DM1 585 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 CYFIP2Q96F07 1278 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 VTA1Q9NP79 307 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 PRODHO43272 600 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 IDH3BO43837 385 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 UBXN2AP68543 259 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 PCDHA1Q9Y5I3 950 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 AATKQ6ZMQ8 1374 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 ECE2O60344 883 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 RBMXL2O75526 392 aaKnown RBP16.55■□□□□ 0.24
UBR3-201ENST00000272793 BRAFP15056 766 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 POU5F1Q01860 360 aaKnown RBP16.55■□□□□ 0.24
UBR3-201ENST00000272793 TRADDQ15628 312 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 EFHBQ8N7U6 833 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 FAM172AQ8WUF8 416 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 ZC3H4Q9UPT8 1303 aaKnown RBP16.55■□□□□ 0.24
UBR3-201ENST00000272793 OR7A10O76100 309 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 PTPN12Q05209 780 aaKnown RBP16.55■□□□□ 0.24
UBR3-201ENST00000272793 PMF1Q6P1K2 205 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 TRPM8Q7Z2W7 1104 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 PCDHB8Q9UN66 801 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 SYNGAP1Q96PV0 1343 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 MAP3K1Q13233 1512 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 MARCH10Q8NA82 808 aaPredicted RBP16.55■□□□□ 0.24
UBR3-201ENST00000272793 SPATA5Q8NB90 893 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 DCPSQ96C86 337 aaKnown RBP16.55■□□□□ 0.24
UBR3-201ENST00000272793 RPS6KB2Q9UBS0 482 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 STK39Q9UEW8 545 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 SIK3Q9Y2K2 1263 aa16.55■□□□□ 0.24
UBR3-201ENST00000272793 PARNO95453 639 aaKnown RBP16.54■□□□□ 0.24
UBR3-201ENST00000272793 HEATR6Q6AI08 1181 aaKnown RBP16.54■□□□□ 0.24
UBR3-201ENST00000272793 SLC13A5Q86YT5 568 aaPredicted RBP16.54■□□□□ 0.24
UBR3-201ENST00000272793 SPON2Q9BUD6 331 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 CYLDQ9NQC7 956 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 ATP9BO43861 1147 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 FGGP02679 453 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.54■□□□□ 0.24
UBR3-201ENST00000272793 PROSER1Q86XN7 944 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 ARID1BQ8NFD5 2236 aaPredicted RBP16.54■□□□□ 0.24
UBR3-201ENST00000272793 ZNF862O60290 1169 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 PJA1Q8NG27 643 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 HEMGNQ9BXL5 484 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 CD274Q9NZQ7 290 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 CMA1P23946 247 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 PRIM2P49643 509 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 RAB2AP61019 212 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 ZNF438Q7Z4V0 828 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 TRIM48Q8IWZ4 208 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 ASAP1Q9ULH1 1129 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.54■□□□□ 0.24
UBR3-201ENST00000272793 ZBTB7BO15156 539 aaPredicted RBP16.54■□□□□ 0.24
UBR3-201ENST00000272793 MFAP3LO75121 409 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 PGK2P07205 417 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 PYHIN1Q6K0P9 492 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 SEPT1Q8WYJ6 367 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 ACAP3Q96P50 834 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 ZCCHC17Q9NP64 241 aaKnown RBP16.54■□□□□ 0.24
UBR3-201ENST00000272793 PALD1Q9ULE6 856 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 WDR17Q8IZU2 1322 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 RALGAPBQ86X10 1494 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 PNMA6EA0A0J9YXQ4 647 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 CCDC162PA2VCL2 907 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 KPNA5O15131 536 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 LCA5LO95447 670 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 HIST1H2AGP0C0S8 130 aaPredicted RBP16.54■□□□□ 0.24
UBR3-201ENST00000272793 HIST1H2ADP20671 130 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 MSR1P21757 451 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 SARSP49591 514 aaKnown RBP16.54■□□□□ 0.24
UBR3-201ENST00000272793 CERKLQ49MI3 558 aaPredicted RBP16.54■□□□□ 0.24
UBR3-201ENST00000272793 C4orf46Q504U0 113 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 DPY19L2Q6NUT2 758 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 CCDC185Q8N715 623 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 IPCEF1Q8WWN9 437 aaPredicted RBP16.54■□□□□ 0.24
UBR3-201ENST00000272793 HIST1H2AHQ96KK5 128 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 HIST1H2AJQ99878 128 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 H2AFJQ9BTM1 129 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 C6orf62Q9GZU0 229 aaPredicted RBP16.54■□□□□ 0.24
UBR3-201ENST00000272793 DSEQ9UL01 958 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
UBR3-201ENST00000272793 MYH14Q7Z406 1995 aaKnown RBP16.53■□□□□ 0.24
UBR3-201ENST00000272793 CDC25BP30305 580 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 DCTN2Q13561 401 aaKnown RBP16.53■□□□□ 0.24
UBR3-201ENST00000272793 GPR162Q16538 588 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 WLSQ5T9L3 541 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 ABRAXAS1Q6UWZ7 409 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 OTOAQ7RTW8 1153 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 KBTBD3Q8NAB2 608 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 CABLES1Q8TDN4 633 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 DIDO1Q9BTC0 2240 aaKnown RBP16.53■□□□□ 0.24
UBR3-201ENST00000272793 TIMM44O43615 452 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 CHP2O43745 196 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 TCEA3O75764 348 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 NR1H3Q13133 447 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 ZNF24P17028 368 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 CCND2P30279 289 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 ZNF544Q6NX49 715 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms