RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 TMEM130Q8N3G9 435 aa13.51□□□□□ -0.25
CAPN9-201ENST00000271971 PPM1KQ8N3J5 372 aa13.51□□□□□ -0.25
CAPN9-201ENST00000271971 MNS1Q8NEH6 495 aa13.51□□□□□ -0.25
CAPN9-201ENST00000271971 WNT8BQ93098 351 aa13.51□□□□□ -0.25
CAPN9-201ENST00000271971 HAUS4Q9H6D7 363 aa13.51□□□□□ -0.25
CAPN9-201ENST00000271971 RAB20Q9NX57 234 aa13.51□□□□□ -0.25
CAPN9-201ENST00000271971 DDX20Q9UHI6 824 aaKnown RBP13.51□□□□□ -0.25
CAPN9-201ENST00000271971 GTF2IRD1Q9UHL9 959 aa13.51□□□□□ -0.25
CAPN9-201ENST00000271971 COQ4Q9Y3A0 265 aa13.51□□□□□ -0.25
CAPN9-201ENST00000271971 RCCD1A6NED2 376 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 FANCGO15287 622 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 KPNA6O60684 536 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 VNN1O95497 513 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 C4BPAP04003 597 aaKnown RBP13.5□□□□□ -0.25
CAPN9-201ENST00000271971 PTK2Q05397 1052 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 ASTE1Q2TB18 679 aaPredicted RBP13.5□□□□□ -0.25
CAPN9-201ENST00000271971 ZACNQ401N2 412 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 SRGAP1Q7Z6B7 1085 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 GPR161Q8N6U8 529 aaKnown RBP13.5□□□□□ -0.25
CAPN9-201ENST00000271971 KLHDC9Q8NEP7 349 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 STK33Q9BYT3 514 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 GCOM2Q9BZD3 368 aaPredicted RBP13.5□□□□□ -0.25
CAPN9-201ENST00000271971 MTMR12Q9C0I1 747 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 PTCH2Q9Y6C5 1203 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 GOLGA6L9A6NEM1 432 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 EIF3CLB5ME19 914 aaKnown RBP13.5□□□□□ -0.25
CAPN9-201ENST00000271971 MEFVO15553 781 aaPredicted RBP13.5□□□□□ -0.25
CAPN9-201ENST00000271971 EVI5O60447 810 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 HLA-DRAP01903 254 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 SOX5P35711 763 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 ARHGAP25P42331 645 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 PIK3CAP42336 1068 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 SPOPLQ6IQ16 392 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 CCSAPQ6IQ19 270 aaPredicted RBP13.5□□□□□ -0.25
CAPN9-201ENST00000271971 CATSPER4Q7RTX7 472 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 PXYLP1Q8TE99 480 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 TATDN2Q93075 761 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 KREMEN1Q96MU8 473 aa13.5□□□□□ -0.25
CAPN9-201ENST00000271971 EIF3CQ99613 913 aaKnown RBP13.5□□□□□ -0.25
CAPN9-201ENST00000271971 FAM170AA1A519 330 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 GNAT1P11488 350 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 DARSP14868 501 aaKnown RBP13.49□□□□□ -0.25
CAPN9-201ENST00000271971 STAT1P42224 750 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 NKX3-2P78367 333 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 ENPEPQ07075 957 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 SNX17Q15036 470 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 ZNF571Q7Z3V5 609 aaPredicted RBP13.49□□□□□ -0.25
CAPN9-201ENST00000271971 EFCAB13Q8IY85 973 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.49□□□□□ -0.25
CAPN9-201ENST00000271971 MYO6Q9UM54 1294 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 TRIM17Q9Y577 477 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 GRIN2DO15399 1336 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 SSU72P8A0A1W2PR75 194 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 FOXN3O00409 490 aaPredicted RBP13.49□□□□□ -0.25
CAPN9-201ENST00000271971 CLSTN1O94985 981 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 IPO7O95373 1038 aaKnown RBP13.49□□□□□ -0.25
CAPN9-201ENST00000271971 CTSHP09668 335 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 STAG3L1P0CL83 205 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 HOXA11P31270 313 aaPredicted RBP13.49□□□□□ -0.25
CAPN9-201ENST00000271971 KIAA1328Q86T90 577 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 HELQQ8TDG4 1101 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 DHX38Q92620 1227 aaKnown RBP13.49□□□□□ -0.25
CAPN9-201ENST00000271971 NT5C1BQ96P26 610 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 LACRTQ9GZZ8 138 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 SAGE1Q9NXZ1 904 aa13.49□□□□□ -0.25
CAPN9-201ENST00000271971 A0A087X0T9 212 aa13.48□□□□□ -0.25
CAPN9-201ENST00000271971 A0A1B0GUA9 196 aa13.48□□□□□ -0.25
CAPN9-201ENST00000271971 MYCP01106 439 aaPredicted RBP13.48□□□□□ -0.25
CAPN9-201ENST00000271971 GNRH1P01148 92 aa13.48□□□□□ -0.25
CAPN9-201ENST00000271971 FAM228BP0C875 321 aa13.48□□□□□ -0.25
CAPN9-201ENST00000271971 MCF2P10911 925 aa13.48□□□□□ -0.25
CAPN9-201ENST00000271971 RFX1P22670 979 aa13.48□□□□□ -0.25
CAPN9-201ENST00000271971 EIF4BP23588 611 aaKnown RBP13.48□□□□□ -0.25
CAPN9-201ENST00000271971 CST5P28325 142 aaPredicted RBP13.48□□□□□ -0.25
CAPN9-201ENST00000271971 USP8P40818 1118 aa13.48□□□□□ -0.25
CAPN9-201ENST00000271971 TFAMQ00059 246 aaKnown RBP13.48□□□□□ -0.25
CAPN9-201ENST00000271971 CC2D1AQ6P1N0 951 aaPredicted RBP13.48□□□□□ -0.25
CAPN9-201ENST00000271971 DNAAF5Q86Y56 855 aa13.48□□□□□ -0.25
CAPN9-201ENST00000271971 WDR49Q8IV35 697 aa13.48□□□□□ -0.25
CAPN9-201ENST00000271971 SH3TC2Q8TF17 1288 aa13.48□□□□□ -0.25
CAPN9-201ENST00000271971 EXOC4Q96A65 974 aa13.48□□□□□ -0.25
CAPN9-201ENST00000271971 WDR24Q96S15 920 aa13.48□□□□□ -0.25
CAPN9-201ENST00000271971 IFIH1Q9BYX4 1025 aaKnown RBP13.48□□□□□ -0.25
CAPN9-201ENST00000271971 RPF1Q9H9Y2 349 aaKnown RBP13.48□□□□□ -0.25
CAPN9-201ENST00000271971 ADAMTS1Q9UHI8 967 aa13.48□□□□□ -0.25
CAPN9-201ENST00000271971 RALGAPA2Q2PPJ7 1873 aa13.48□□□□□ -0.25
CAPN9-201ENST00000271971 NPTXRO95502 500 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 NFICP08651 508 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 GRK4P32298 578 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 KRT83P78385 493 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 SPA17Q15506 151 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 SLAIN1Q8ND83 568 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 EIF2AQ9BY44 585 aaKnown RBP13.47□□□□□ -0.25
CAPN9-201ENST00000271971 ACP6Q9NPH0 428 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 CWC15Q9P013 229 aaKnown RBP13.47□□□□□ -0.25
CAPN9-201ENST00000271971 DUSP10Q9Y6W6 482 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 MYH10P35580 1976 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 UMODL1Q5DID0 1318 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 PHACTR2O75167 634 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 LCA5LO95447 670 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms