RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 AGPAT3Q9NRZ7 376 aa26.71■■□□□ 1.87
SSBP4-201ENST00000270061 AGPAT5Q9NUQ2 364 aa26.71■■□□□ 1.87
SSBP4-201ENST00000270061 ARMCX3Q9UH62 379 aaPredicted RBP26.71■■□□□ 1.87
SSBP4-201ENST00000270061 SIK3Q9Y2K2 1263 aa26.71■■□□□ 1.87
SSBP4-201ENST00000270061 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.71■■□□□ 1.87
SSBP4-201ENST00000270061 TTC28Q96AY4 2481 aa26.71■■□□□ 1.87
SSBP4-201ENST00000270061 PLXNA4Q9HCM2 1894 aa26.71■■□□□ 1.87
SSBP4-201ENST00000270061 ARL2P36404 184 aa26.71■■□□□ 1.87
SSBP4-201ENST00000270061 NPTX2P47972 431 aa26.71■■□□□ 1.87
SSBP4-201ENST00000270061 C12orf56Q8IXR9 622 aa26.71■■□□□ 1.87
SSBP4-201ENST00000270061 KCNN1Q92952 543 aa26.71■■□□□ 1.87
SSBP4-201ENST00000270061 CLIC2O15247 247 aa26.7■■□□□ 1.86
SSBP4-201ENST00000270061 AKAP3O75969 853 aa26.7■■□□□ 1.86
SSBP4-201ENST00000270061 EPB41P11171 864 aaKnown RBP26.7■■□□□ 1.86
SSBP4-201ENST00000270061 SKIP12755 728 aa26.7■■□□□ 1.86
SSBP4-201ENST00000270061 ZNF598Q86UK7 904 aaKnown RBP26.7■■□□□ 1.86
SSBP4-201ENST00000270061 SYCP3Q8IZU3 236 aa26.7■■□□□ 1.86
SSBP4-201ENST00000270061 TMEM161BQ8NDZ6 487 aa26.7■■□□□ 1.86
SSBP4-201ENST00000270061 ASAP3Q8TDY4 903 aa26.7■■□□□ 1.86
SSBP4-201ENST00000270061 LMAN2LQ9H0V9 348 aa26.7■■□□□ 1.86
SSBP4-201ENST00000270061 POLR3FQ9H1D9 316 aaPredicted RBP26.7■■□□□ 1.86
SSBP4-201ENST00000270061 AAASQ9NRG9 546 aa26.7■■□□□ 1.86
SSBP4-201ENST00000270061 NCOR1O75376 2440 aa26.7■■□□□ 1.86
SSBP4-201ENST00000270061 A0A1W2PQJ5 194 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 TTC26A0AVF1 554 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 GRM6O15303 877 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 ABCD1P33897 745 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 PTENP60484 403 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 POU5F1BQ06416 359 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 CAPSQ13938 189 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 TIGD5Q53EQ6 642 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 RNF19AQ9NV58 838 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 RNF225M0QZC1 329 aaPredicted RBP26.69■■□□□ 1.86
SSBP4-201ENST00000270061 SLC16A4O15374 487 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 ERLIN2O94905 339 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 ATF7P17544 494 aaPredicted RBP26.69■■□□□ 1.86
SSBP4-201ENST00000270061 SCP2P22307 547 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 GLRA2P23416 452 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 PSMC2P35998 433 aaKnown RBP26.69■■□□□ 1.86
SSBP4-201ENST00000270061 PCBP1Q15365 356 aaKnown RBP eCLIP26.69■■□□□ 1.861e-8■■■■□ 20.1
SSBP4-201ENST00000270061 E4F1Q66K89 784 aaPredicted RBP26.69■■□□□ 1.86
SSBP4-201ENST00000270061 CCAR2Q8N163 923 aaKnown RBP26.69■■□□□ 1.86
SSBP4-201ENST00000270061 BORCS6Q96GS4 357 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 CASD1Q96PB1 797 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 ALG13Q9NP73 1137 aaKnown RBP26.69■■□□□ 1.86
SSBP4-201ENST00000270061 ABHD10Q9NUJ1 306 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 FAM105AQ9NUU6 356 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 COG5Q9UP83 839 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 PLAGL2Q9UPG8 496 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 LUC7L2Q9Y383 392 aaKnown RBP26.69■■□□□ 1.86
SSBP4-201ENST00000270061 PCDHB12Q9Y5F1 795 aa26.69■■□□□ 1.86
SSBP4-201ENST00000270061 KRT9P35527 623 aa26.68■■□□□ 1.86
SSBP4-201ENST00000270061 RAB27AP51159 221 aa26.68■■□□□ 1.86
SSBP4-201ENST00000270061 MRPS5P82675 430 aaKnown RBP26.68■■□□□ 1.86
SSBP4-201ENST00000270061 KLHL23Q8NBE8 558 aa26.68■■□□□ 1.86
SSBP4-201ENST00000270061 KMT5AQ9NQR1 393 aa26.68■■□□□ 1.86
SSBP4-201ENST00000270061 EXOC7Q9UPT5 735 aa26.68■■□□□ 1.86
SSBP4-201ENST00000270061 H0YCG3 227 aa26.67■■□□□ 1.86
SSBP4-201ENST00000270061 INO80B-WBP1J3KQ70 363 aa26.67■■□□□ 1.86
SSBP4-201ENST00000270061 DLL1O00548 723 aa26.67■■□□□ 1.86
SSBP4-201ENST00000270061 OFD1O75665 1012 aa26.67■■□□□ 1.86
SSBP4-201ENST00000270061 TRIM21P19474 475 aaKnown RBP26.67■■□□□ 1.86
SSBP4-201ENST00000270061 TJAP1Q5JTD0 557 aa26.67■■□□□ 1.86
SSBP4-201ENST00000270061 CLLU1OSQ5K130 101 aa26.67■■□□□ 1.86
SSBP4-201ENST00000270061 IFNLR1Q8IU57 520 aaPredicted RBP26.67■■□□□ 1.86
SSBP4-201ENST00000270061 LRRC43Q8N309 656 aa26.67■■□□□ 1.86
SSBP4-201ENST00000270061 OR8K1Q8NGG5 319 aa26.67■■□□□ 1.86
SSBP4-201ENST00000270061 BSNDQ8WZ55 320 aa26.67■■□□□ 1.86
SSBP4-201ENST00000270061 HLA-CQ95604 372 aa26.67■■□□□ 1.86
SSBP4-201ENST00000270061 IFT74Q96LB3 600 aa26.67■■□□□ 1.86
SSBP4-201ENST00000270061 DNAJC7Q99615 494 aa26.67■■□□□ 1.86
SSBP4-201ENST00000270061 IKZF4Q9H2S9 585 aa26.67■■□□□ 1.86
SSBP4-201ENST00000270061 HCSTQ9UBK5 93 aa26.67■■□□□ 1.86
SSBP4-201ENST00000270061 TCF20Q9UGU0 1960 aaKnown RBP26.66■■□□□ 1.86
SSBP4-201ENST00000270061 CCDC169A6NNP5 214 aa26.66■■□□□ 1.86
SSBP4-201ENST00000270061 ITGB1P05556 798 aa26.66■■□□□ 1.86
SSBP4-201ENST00000270061 CASP4P49662 377 aa26.66■■□□□ 1.86
SSBP4-201ENST00000270061 HELQQ8TDG4 1101 aa26.66■■□□□ 1.86
SSBP4-201ENST00000270061 ASB2Q96Q27 587 aa26.66■■□□□ 1.86
SSBP4-201ENST00000270061 NFKBIZQ9BYH8 718 aa26.66■■□□□ 1.86
SSBP4-201ENST00000270061 EDEM3Q9BZQ6 932 aa26.66■■□□□ 1.86
SSBP4-201ENST00000270061 TBX20Q9UMR3 447 aa26.66■■□□□ 1.86
SSBP4-201ENST00000270061 MUC3AQ02505 3323 aa26.66■■□□□ 1.86
SSBP4-201ENST00000270061 CCP110O43303 1012 aa26.66■■□□□ 1.86
SSBP4-201ENST00000270061 HOXA11P31270 313 aaPredicted RBP26.66■■□□□ 1.86
SSBP4-201ENST00000270061 TFF2Q03403 129 aa26.66■■□□□ 1.86
SSBP4-201ENST00000270061 NCBP1Q09161 790 aaKnown RBP26.66■■□□□ 1.86
SSBP4-201ENST00000270061 KCNH2Q12809 1159 aa26.66■■□□□ 1.86
SSBP4-201ENST00000270061 MAP4K3Q8IVH8 894 aa26.66■■□□□ 1.86
SSBP4-201ENST00000270061 PCMTD1Q96MG8 357 aaPredicted RBP26.66■■□□□ 1.86
SSBP4-201ENST00000270061 NSUN3Q9H649 340 aaKnown RBP26.66■■□□□ 1.86
SSBP4-201ENST00000270061 CWH43Q9H720 699 aa26.66■■□□□ 1.86
SSBP4-201ENST00000270061 ZNF623O75123 536 aa26.65■■□□□ 1.86
SSBP4-201ENST00000270061 LAG3P18627 525 aa26.65■■□□□ 1.86
SSBP4-201ENST00000270061 KLK7P49862 253 aa26.65■■□□□ 1.86
SSBP4-201ENST00000270061 ZBED6P86452 979 aa26.65■■□□□ 1.86
SSBP4-201ENST00000270061 KCNMA1Q12791 1236 aa26.65■■□□□ 1.86
SSBP4-201ENST00000270061 AAK1Q2M2I8 961 aa26.65■■□□□ 1.86
SSBP4-201ENST00000270061 TMTC1Q8IUR5 882 aa26.65■■□□□ 1.86
SSBP4-201ENST00000270061 FAM186BQ8IYM0 893 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms