RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 TMEM62Q0P6H9 643 aa17.64■□□□□ 0.42
TPM1-201ENST00000267996 BIRC3Q13489 604 aa17.64■□□□□ 0.42
TPM1-201ENST00000267996 NAB2Q15742 525 aa17.64■□□□□ 0.42
TPM1-201ENST00000267996 DUOXA2Q1HG44 320 aa17.64■□□□□ 0.42
TPM1-201ENST00000267996 NBPF20Q3BBV1 942 aa17.64■□□□□ 0.42
TPM1-201ENST00000267996 TAF2Q6P1X5 1199 aa17.64■□□□□ 0.42
TPM1-201ENST00000267996 VPS36Q86VN1 386 aa17.64■□□□□ 0.42
TPM1-201ENST00000267996 MYRIPQ8NFW9 859 aa17.64■□□□□ 0.42
TPM1-201ENST00000267996 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.64■□□□□ 0.42
TPM1-201ENST00000267996 GTF2IRD1Q9UHL9 959 aa17.64■□□□□ 0.42
TPM1-201ENST00000267996 NAGPAQ9UK23 515 aa17.64■□□□□ 0.42
TPM1-201ENST00000267996 MEFVO15553 781 aaPredicted RBP17.64■□□□□ 0.41
TPM1-201ENST00000267996 EIF4BP23588 611 aaKnown RBP17.64■□□□□ 0.41
TPM1-201ENST00000267996 WDR44Q5JSH3 913 aa17.64■□□□□ 0.41
TPM1-201ENST00000267996 TRAPPC11Q7Z392 1133 aa17.64■□□□□ 0.41
TPM1-201ENST00000267996 SESTD1Q86VW0 696 aa17.64■□□□□ 0.41
TPM1-201ENST00000267996 EFCAB13Q8IY85 973 aa17.64■□□□□ 0.41
TPM1-201ENST00000267996 TMEM192Q8IY95 271 aa17.64■□□□□ 0.41
TPM1-201ENST00000267996 SLC35F6Q8N357 371 aa17.64■□□□□ 0.41
TPM1-201ENST00000267996 ERO1AQ96HE7 468 aa17.64■□□□□ 0.41
TPM1-201ENST00000267996 OSMRQ99650 979 aa17.64■□□□□ 0.41
TPM1-201ENST00000267996 C1orf112Q9NSG2 853 aa17.64■□□□□ 0.41
TPM1-201ENST00000267996 DUSP10Q9Y6W6 482 aa17.64■□□□□ 0.41
TPM1-201ENST00000267996 CXCL8P10145 99 aa17.63■□□□□ 0.41
TPM1-201ENST00000267996 NCOA4Q13772 614 aa17.63■□□□□ 0.41
TPM1-201ENST00000267996 DCAF4L1Q3SXM0 396 aa17.63■□□□□ 0.41
TPM1-201ENST00000267996 SMYD5Q6GMV2 418 aa17.63■□□□□ 0.41
TPM1-201ENST00000267996 LNX1Q8TBB1 728 aaPredicted RBP17.63■□□□□ 0.41
TPM1-201ENST00000267996 APOBEC3GQ9HC16 384 aaKnown RBP17.63■□□□□ 0.41
TPM1-201ENST00000267996 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.63■□□□□ 0.41
TPM1-201ENST00000267996 SAGE1Q9NXZ1 904 aa17.63■□□□□ 0.41
TPM1-201ENST00000267996 FKTNO75072 461 aa17.62■□□□□ 0.41
TPM1-201ENST00000267996 ASS1P00966 412 aaKnown RBP17.62■□□□□ 0.41
TPM1-201ENST00000267996 FGFR4P22455 802 aa17.62■□□□□ 0.41
TPM1-201ENST00000267996 GRM5P41594 1212 aa17.62■□□□□ 0.41
TPM1-201ENST00000267996 CRYBB1P53674 252 aaPredicted RBP17.62■□□□□ 0.41
TPM1-201ENST00000267996 OSTNP61366 133 aa17.62■□□□□ 0.41
TPM1-201ENST00000267996 SNX17Q15036 470 aa17.62■□□□□ 0.41
TPM1-201ENST00000267996 ALKBH5Q6P6C2 394 aaKnown RBP17.62■□□□□ 0.41
TPM1-201ENST00000267996 CATSPER4Q7RTX7 472 aa17.62■□□□□ 0.41
TPM1-201ENST00000267996 RAET1EQ8TD07 263 aa17.62■□□□□ 0.41
TPM1-201ENST00000267996 FAM212AQ96EL1 285 aa17.62■□□□□ 0.41
TPM1-201ENST00000267996 AGPAT1Q99943 283 aa17.62■□□□□ 0.41
TPM1-201ENST00000267996 ADPGKQ9BRR6 497 aa17.62■□□□□ 0.41
TPM1-201ENST00000267996 MTMR12Q9C0I1 747 aa17.62■□□□□ 0.41
TPM1-201ENST00000267996 ASB7Q9H672 318 aa17.62■□□□□ 0.41
TPM1-201ENST00000267996 DDX20Q9UHI6 824 aaKnown RBP17.62■□□□□ 0.41
TPM1-201ENST00000267996 BTNL10A8MVZ5 291 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 LACTBL1A8MY62 500 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 PHACTR2O75167 634 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 CST3P01034 146 aaPredicted RBP17.61■□□□□ 0.41
TPM1-201ENST00000267996 ASGR1P07306 291 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 AXLP30530 894 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 PRMT2P55345 433 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 HTRA3P83110 453 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 NCBP1Q09161 790 aaKnown RBP17.61■□□□□ 0.41
TPM1-201ENST00000267996 KCNA10Q16322 511 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 SLC10A6Q3KNW5 377 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 GDF6Q6KF10 455 aaPredicted RBP17.61■□□□□ 0.41
TPM1-201ENST00000267996 APBB1IPQ7Z5R6 666 aaPredicted RBP17.61■□□□□ 0.41
TPM1-201ENST00000267996 RNF10Q8N5U6 811 aaKnown RBP17.61■□□□□ 0.41
TPM1-201ENST00000267996 TMEM40Q8WWA1 233 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 ELMO3Q96BJ8 720 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 NOCTQ9UK39 431 aaKnown RBP17.61■□□□□ 0.41
TPM1-201ENST00000267996 INTUQ9ULD6 942 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 GINS2Q9Y248 185 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 CYP26A1O43174 497 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 GTF2F1P35269 517 aaKnown RBP eCLIP17.61■□□□□ 0.41
TPM1-201ENST00000267996 NOP14P78316 857 aaKnown RBP17.61■□□□□ 0.41
TPM1-201ENST00000267996 TFAMQ00059 246 aaKnown RBP17.61■□□□□ 0.41
TPM1-201ENST00000267996 CUL2Q13617 745 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 ARHGEF6Q15052 776 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 SCARA3Q6AZY7 606 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 SPOPLQ6IQ16 392 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 NOTUMQ6P988 496 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 SLC27A1Q6PCB7 646 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 RPAINQ86UA6 219 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 PCSK9Q8NBP7 692 aaKnown RBP17.61■□□□□ 0.41
TPM1-201ENST00000267996 EPS8L1Q8TE68 723 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 SECISBP2LQ93073 1101 aaKnown RBP17.61■□□□□ 0.41
TPM1-201ENST00000267996 SALL4Q9UJQ4 1053 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 NUB1Q9Y5A7 615 aa17.61■□□□□ 0.41
TPM1-201ENST00000267996 GRIN2DO15399 1336 aa17.6■□□□□ 0.41
TPM1-201ENST00000267996 MROH7Q68CQ1 1323 aa17.6■□□□□ 0.41
TPM1-201ENST00000267996 CTAGE9A4FU28 777 aa17.6■□□□□ 0.41
TPM1-201ENST00000267996 SGPL1O95470 568 aa17.6■□□□□ 0.41
TPM1-201ENST00000267996 TNNC2P02585 160 aa17.6■□□□□ 0.41
TPM1-201ENST00000267996 CHRNB2P17787 502 aa17.6■□□□□ 0.41
TPM1-201ENST00000267996 ACO1P21399 889 aaKnown RBP17.6■□□□□ 0.41
TPM1-201ENST00000267996 TNFAIP3P21580 790 aa17.6■□□□□ 0.41
TPM1-201ENST00000267996 TBXAS1P24557 533 aaPredicted RBP17.6■□□□□ 0.41
TPM1-201ENST00000267996 SERINC5Q86VE9 423 aa17.6■□□□□ 0.41
TPM1-201ENST00000267996 GLYCTKQ8IVS8 523 aa17.6■□□□□ 0.41
TPM1-201ENST00000267996 ZNF296Q8WUU4 475 aaPredicted RBP17.6■□□□□ 0.41
TPM1-201ENST00000267996 DHX38Q92620 1227 aaKnown RBP17.6■□□□□ 0.41
TPM1-201ENST00000267996 ANKRD36BP1Q96IX9 119 aa17.6■□□□□ 0.41
TPM1-201ENST00000267996 ACAP3Q96P50 834 aa17.6■□□□□ 0.41
TPM1-201ENST00000267996 PACSIN1Q9BY11 444 aa17.6■□□□□ 0.41
TPM1-201ENST00000267996 CNTN6Q9UQ52 1028 aa17.6■□□□□ 0.41
TPM1-201ENST00000267996 MACROD2A1Z1Q3 448 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms