RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 TXNDC16Q9P2K2 825 aa15.43■□□□□ 0.06
PDLIM2-201ENST00000265810 ATP8B3O60423 1300 aa15.43■□□□□ 0.06
PDLIM2-201ENST00000265810 MIF4GDA9UHW6 222 aaKnown RBP15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 TMEM106CQ9BVX2 250 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 SHANK3Q9BYB0 1731 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 MAFO75444 373 aaPredicted RBP15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 KIAA0754O94854 1291 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 ZRANB2O95218 330 aaKnown RBP eCLIP15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 CUL2Q13617 745 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 OSBPL9Q96SU4 736 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 CGRRF1Q99675 332 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 GPR20Q99678 358 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 SELENOSQ9BQE4 189 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 IQCGQ9H095 443 aaKnown RBP15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 IKZF4Q9H2S9 585 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 DPP3Q9NY33 737 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 GOLGA6BA6NDN3 693 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 UPP2O95045 317 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 ANXA13P27216 316 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 SPOPLQ6IQ16 392 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 ZPBP2Q6X784 338 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 TRAPPC11Q7Z392 1133 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 TNIP3Q96KP6 325 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 FAM169AQ9Y6X4 670 aa15.42■□□□□ 0.06
PDLIM2-201ENST00000265810 ASTN1O14525 1302 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 TFRCP02786 760 aaKnown RBP15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 GJB1P08034 283 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 ATN1P54259 1190 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 SLC7A5Q01650 507 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 FAM102AQ5T9C2 384 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 SLC35G2Q8TBE7 412 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 PARD3BQ8TEW8 1205 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 HSPH1Q92598 858 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 L3MBTL3Q96JM7 780 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 HEMGNQ9BXL5 484 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 STMN4Q9H169 189 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 PRDM10Q9NQV6 1147 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 PCSK1NQ9UHG2 260 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 AKAP11Q9UKA4 1901 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 OPLAHO14841 1288 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 GTF2H1P32780 548 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 GLB1LQ6UWU2 654 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 CHORDC1Q9UHD1 332 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 PASKQ96RG2 1323 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 DUSP28Q4G0W2 176 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 FAM49BQ9NUQ9 324 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 SEPT10Q9P0V9 454 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 TNRC6CQ9HCJ0 1690 aaKnown RBP15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 GPR182O15218 404 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 CAPSQ13938 189 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 PPP6R3Q5H9R7 873 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 MMS22LQ6ZRQ5 1243 aa15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 PDZD4Q76G19 769 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-201ENST00000265810 GTPBP10A4D1E9 387 aaKnown RBP15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 SGK1O00141 431 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 RGS7P49802 495 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 MYL6P60660 151 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 PPARDQ03181 441 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 CASC4Q6P4E1 433 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 CEP128Q6ZU80 1094 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 RNF139Q8WU17 664 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 NSMCE1Q8WV22 266 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 HAUS1Q96CS2 278 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 C18orf8Q96DM3 657 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 NT5C1AQ9BXI3 368 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 KCTD10Q9H3F6 313 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 UBQLN1Q9UMX0 589 aaKnown RBP15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 ZNF862O60290 1169 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 SGPL1O95470 568 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 ICAM3P32942 547 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 ARL4AP40617 200 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 RNF25Q96BH1 459 aaPredicted RBP15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 HMX1Q9NP08 348 aaPredicted RBP15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 KCNK9Q9NPC2 374 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 SLC38A7Q9NVC3 462 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 ARHGAP20Q9P2F6 1191 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 NAGPAQ9UK23 515 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 MYBL1P10243 752 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 ATF2P15336 505 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 HSPA6P17066 643 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 CBWD6Q4V339 395 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 CBWD3Q5JTY5 395 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 CBWD5Q5RIA9 395 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 TATDN2Q93075 761 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 MAML3Q96JK9 1138 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 SNTG2Q9NY99 539 aa15.4■□□□□ 0.06
PDLIM2-201ENST00000265810 TGFB1I1O43294 461 aa15.39■□□□□ 0.06
PDLIM2-201ENST00000265810 SDC4P31431 198 aa15.39■□□□□ 0.06
PDLIM2-201ENST00000265810 ELF1P32519 619 aa15.39■□□□□ 0.06
PDLIM2-201ENST00000265810 PPP2R5DQ14738 602 aa15.39■□□□□ 0.06
PDLIM2-201ENST00000265810 FAM117BQ6P1L5 589 aa15.39■□□□□ 0.06
PDLIM2-201ENST00000265810 TAF2Q6P1X5 1199 aa15.39■□□□□ 0.06
PDLIM2-201ENST00000265810 DHX38Q92620 1227 aaKnown RBP15.39■□□□□ 0.06
PDLIM2-201ENST00000265810 PARD6BQ9BYG5 372 aa15.39■□□□□ 0.06
PDLIM2-201ENST00000265810 PARVAQ9NVD7 372 aa15.39■□□□□ 0.06
PDLIM2-201ENST00000265810 INTS13Q9NVM9 706 aa15.39■□□□□ 0.06
PDLIM2-201ENST00000265810 ATMINO43313 823 aaPredicted RBP15.39■□□□□ 0.05
PDLIM2-201ENST00000265810 BRD2P25440 801 aaKnown RBP15.39■□□□□ 0.05
PDLIM2-201ENST00000265810 HPDP32754 393 aaPredicted RBP15.39■□□□□ 0.05
PDLIM2-201ENST00000265810 DLG4P78352 724 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms