RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 CYP2B6P20813 491 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 FGFR4P22455 802 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 CDK17Q00537 523 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 CXCL9Q07325 125 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 ITPRIPL1Q6GPH6 555 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 APPL2Q8NEU8 664 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.79□□□□□ -0.04
CDH3-201ENST00000264012 MCEEQ96PE7 176 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 TFR2Q9UP52 801 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 IL18RAPO95256 599 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 TCF7P36402 384 aaPredicted RBP14.79□□□□□ -0.04
CDH3-201ENST00000264012 PPARGP37231 505 aaPredicted RBP14.79□□□□□ -0.04
CDH3-201ENST00000264012 BTBD8Q5XKL5 378 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 NYAP1Q6ZVC0 841 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 GPRC5CQ9NQ84 441 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 ALG6Q9Y672 507 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 PLEKP08567 350 aaPredicted RBP14.79□□□□□ -0.04
CDH3-201ENST00000264012 COMTP21964 271 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 HIF1AQ16665 826 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 NBPF9Q3BBW0 867 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 ICE2Q659A1 982 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 MIPOL1Q8TD10 442 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 SDCCAG3Q96C92 435 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 NIF3L1Q9GZT8 377 aa14.79□□□□□ -0.04
CDH3-201ENST00000264012 PPARGC1AQ9UBK2 798 aaKnown RBP14.79□□□□□ -0.04
CDH3-201ENST00000264012 ANKRD65E5RJM6 399 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 CETPP11597 493 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 GIT2Q14161 759 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 TRAPPC11Q7Z392 1133 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 TBC1D1Q86TI0 1168 aaPredicted RBP14.78□□□□□ -0.04
CDH3-201ENST00000264012 SLC4A9Q96Q91 983 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 KATNAL1Q9BW62 490 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 CLGNO14967 610 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 WEE2P0C1S8 567 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 CPB1P15086 417 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 TAC1P20366 129 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 ZNF157P51786 506 aaPredicted RBP14.78□□□□□ -0.04
CDH3-201ENST00000264012 EPC2Q52LR7 807 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 CCNI2Q6ZMN8 369 aaPredicted RBP14.78□□□□□ -0.04
CDH3-201ENST00000264012 CEP120Q8N960 986 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 PPWD1Q96BP3 646 aaKnown RBP14.78□□□□□ -0.04
CDH3-201ENST00000264012 MAP3K20Q9NYL2 800 aaKnown RBP14.78□□□□□ -0.04
CDH3-201ENST00000264012 PPP1R9AQ9ULJ8 1098 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 ATMINO43313 823 aaPredicted RBP14.78□□□□□ -0.04
CDH3-201ENST00000264012 LUC7L3O95232 432 aaKnown RBP14.78□□□□□ -0.04
CDH3-201ENST00000264012 APOEP02649 317 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 MUTP22033 750 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 PID1Q7Z2X4 250 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 PDCD6IPQ8WUM4 868 aaKnown RBP14.78□□□□□ -0.04
CDH3-201ENST00000264012 IFT43Q96FT9 208 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 GOLPH3Q9H4A6 298 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 HPCAL4Q9UM19 191 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 ARHGAP23Q9P227 1491 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 CYP2C9P11712 490 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 MX2P20592 715 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 ERVK-24P63145 666 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 ART3Q13508 389 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 PIGHQ14442 188 aaPredicted RBP14.78□□□□□ -0.04
CDH3-201ENST00000264012 EARS2Q5JPH6 523 aaKnown RBP14.78□□□□□ -0.04
CDH3-201ENST00000264012 TRIM65Q6PJ69 517 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 SYDE1Q6ZW31 735 aaPredicted RBP14.78□□□□□ -0.04
CDH3-201ENST00000264012 TADA2BQ86TJ2 420 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 SCG3Q8WXD2 468 aaKnown RBP14.78□□□□□ -0.04
CDH3-201ENST00000264012 DNAJC7Q99615 494 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 TRIM62Q9BVG3 475 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 SEMA6BQ9H3T3 888 aa14.78□□□□□ -0.04
CDH3-201ENST00000264012 PDGFRBP09619 1106 aa14.77□□□□□ -0.04
CDH3-201ENST00000264012 LRRC14Q15048 493 aa14.77□□□□□ -0.04
CDH3-201ENST00000264012 REXO1L1PQ8IX06 675 aa14.77□□□□□ -0.04
CDH3-201ENST00000264012 TRAIPQ9BWF2 469 aa14.77□□□□□ -0.04
CDH3-201ENST00000264012 USH1CQ9Y6N9 552 aa14.77□□□□□ -0.04
CDH3-201ENST00000264012 CFLARO15519 480 aa14.77□□□□□ -0.04
CDH3-201ENST00000264012 LAMC2Q13753 1193 aa14.77□□□□□ -0.04
CDH3-201ENST00000264012 Q4G0T1 1027 aa14.77□□□□□ -0.04
CDH3-201ENST00000264012 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.77□□□□□ -0.04
CDH3-201ENST00000264012 CHEK2O96017 543 aa14.77□□□□□ -0.05
CDH3-201ENST00000264012 OCRLQ01968 901 aa14.77□□□□□ -0.05
CDH3-201ENST00000264012 CENPPQ6IPU0 288 aa14.77□□□□□ -0.05
CDH3-201ENST00000264012 NDUFAF2Q8N183 169 aa14.77□□□□□ -0.05
CDH3-201ENST00000264012 NOA1Q8NC60 698 aaKnown RBP14.77□□□□□ -0.05
CDH3-201ENST00000264012 NT5C1AQ9BXI3 368 aa14.77□□□□□ -0.05
CDH3-201ENST00000264012 MAGEB5Q9BZ81 275 aa14.77□□□□□ -0.05
CDH3-201ENST00000264012 A0A087X0T9 212 aa14.77□□□□□ -0.05
CDH3-201ENST00000264012 NFIBO00712 420 aa14.77□□□□□ -0.05
CDH3-201ENST00000264012 GRIN3BO60391 1043 aa14.77□□□□□ -0.05
CDH3-201ENST00000264012 FAM228BP0C875 321 aa14.77□□□□□ -0.05
CDH3-201ENST00000264012 VCAM1P19320 739 aa14.77□□□□□ -0.05
CDH3-201ENST00000264012 PON1P27169 355 aa14.77□□□□□ -0.05
CDH3-201ENST00000264012 SH3BGRP55822 239 aaPredicted RBP14.77□□□□□ -0.05
CDH3-201ENST00000264012 GPAT2Q6NUI2 795 aa14.77□□□□□ -0.05
CDH3-201ENST00000264012 KPNA7A9QM74 516 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 PPP1R12AO14974 1030 aaPredicted RBP14.76□□□□□ -0.05
CDH3-201ENST00000264012 CYP2C19P33261 490 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 GCKP35557 465 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 CASP4P49662 377 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 SATB1Q01826 763 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 STAT4Q14765 748 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 CDR2LQ86X02 465 aaPredicted RBP14.76□□□□□ -0.05
CDH3-201ENST00000264012 EPAS1Q99814 870 aa14.76□□□□□ -0.05
CDH3-201ENST00000264012 SPON2Q9BUD6 331 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms