RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 OSBPL7Q9BZF2 842 aa17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 INO80BQ9C086 356 aaPredicted RBP17.21■□□□□ 0.35
PDZRN3-201ENST00000263666 WDR64B1ANS9 1081 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 H7C0C1 242 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 KIAA0391O15091 583 aaKnown RBP17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 PRKCIP41743 596 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 ATP5OP48047 213 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 Q4G0T1 1027 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 FUKQ8N0W3 1084 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 STMN2Q93045 179 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 RNF146Q9NTX7 359 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 DIS3Q9Y2L1 958 aaKnown RBP17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 TMEM191BP0C7N4 346 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 ZSCAN5DPP0CG00 497 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 PRM3Q9NNZ6 103 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 SIPA1L3O60292 1781 aaPredicted RBP17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 BAG2O95816 211 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 SNHG28P0DPA3 235 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 ATP13A4Q4VNC1 1196 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 MDH1BQ5I0G3 518 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 ATP6V0A1Q93050 837 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 HES6Q96HZ4 224 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 ZDHHC15Q96MV8 337 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 PCDHB18PQ96TA0 734 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 MKNK1Q9BUB5 465 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 POLR3FQ9H1D9 316 aaPredicted RBP17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 HERC5Q9UII4 1024 aaKnown RBP17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 NOP56O00567 594 aaKnown RBP17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 STAM2O75886 525 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 MUM1Q2TAK8 710 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 KCNT1Q5JUK3 1230 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 PYROXD1Q8WU10 500 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 SLC7A3Q8WY07 619 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 OSBPL8Q9BZF1 889 aa17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 WRAP73Q9P2S5 460 aaPredicted RBP17.2■□□□□ 0.34
PDZRN3-201ENST00000263666 PHRF1Q9P1Y6 1649 aaKnown RBP17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 RIPK2O43353 540 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 KITP10721 976 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 GBP1P32455 592 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 CHKAP35790 457 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 CYP4A22Q5TCH4 519 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 SNRNP48Q6IEG0 339 aaKnown RBP17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 CHADLQ6NUI6 762 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 SV2AQ7L0J3 742 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 ZC3H18Q86VM9 953 aaKnown RBP17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 CCDC33Q8N5R6 958 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 SIX2Q9NPC8 291 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 PCDHA2Q9Y5H9 948 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 GH1P01241 217 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 ADRB2P07550 413 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 CXCL9Q07325 125 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 UBAP2Q5T6F2 1119 aaKnown RBP17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 RPAINQ86UA6 219 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 NLRP4Q96MN2 994 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 CCDC195A0A1B0GUA6 201 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 WEE2P0C1S8 567 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 TARSP26639 723 aaKnown RBP17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 ELF1P32519 619 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 MSH2P43246 934 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 JAG1P78504 1218 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 MTMR2Q13614 643 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 TTC27Q6P3X3 843 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 KCNV1Q6PIU1 500 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 NSMCE1Q8WV22 266 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 CFAP36Q96G28 342 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 VAV3Q9UKW4 847 aa17.19■□□□□ 0.34
PDZRN3-201ENST00000263666 RARRES1P49788 294 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 PSMC5P62195 406 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 SH3BP5LQ7L8J4 393 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 MREGQ8N565 214 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 PRPF38AQ8NAV1 312 aaKnown RBP17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 ZKSCAN4Q969J2 545 aaPredicted RBP17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 PFASO15067 1338 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 ROBO3Q96MS0 1386 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 EDIL3O43854 480 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 TROVE2P10155 538 aaKnown RBP eCLIP17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 ATP2A2P16615 1042 aaKnown RBP17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 KCNJ2P63252 427 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 COBLL1Q53SF7 1204 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 FAM160B2Q86V87 743 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 EPS8L1Q8TE68 723 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.18■□□□□ 0.343e-8■■■■□ 22.1
PDZRN3-201ENST00000263666 MCEEQ96PE7 176 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 HSD17B14Q9BPX1 270 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 TARS2Q9BW92 718 aaKnown RBP17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 RBAKQ9NYW8 714 aaPredicted RBP17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 PNMA3Q9UL41 463 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 HLA-DRAP01903 254 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 HOXA7P31268 230 aaPredicted RBP17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 NPTX2P47972 431 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 CLK2P49760 499 aaKnown RBP17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 ANGEL2Q5VTE6 544 aaKnown RBP17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 MAML1Q92585 1016 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 NPHS2Q9NP85 383 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 MYOZ2Q9NPC6 264 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 SAE1Q9UBE0 346 aaPredicted RBP17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 ALS2Q96Q42 1657 aa17.18■□□□□ 0.34
PDZRN3-201ENST00000263666 CFAP69A5D8W1 941 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 DCAF12L1Q5VU92 463 aa17.17■□□□□ 0.34
PDZRN3-201ENST00000263666 CNPY4Q8N129 248 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms